Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yjgR [H]

Identifier: 85859929

GI number: 85859929

Start: 2163581

End: 2165071

Strand: Direct

Name: yjgR [H]

Synonym: SYN_00674

Alternate gene names: 85859929

Gene position: 2163581-2165071 (Clockwise)

Preceding gene: 85859928

Following gene: 85859930

Centisome position: 68.05

GC content: 57.08

Gene sequence:

>1491_bases
ATGAACCAGATACTTATAGGCAAGGGTGAGCAGCCTGTTCAATTGCTCGCCAGGTACGGCAACCGGCATGGTCTGATCGC
GGGAGCCACCGGTACCGGCAAGACGATTTCTCTCATGGTACTGGCAGAGGGCTTCTCACGCATGGGTGTACCGGTATTCA
TGGCTGACGTGAAAGGCGATGTCGCCGGCCTGGCAATGGCCGGCACCCCCAACGAAAAGATCCAGCAGCGTGTTAAAGAG
ATCGGGATTGATGGTTACGCCAGCGAGGCGAATCCGGTTTTGTTCTGGGATGTGTTCGGCAAGAATGGCCATCGGGTGCG
CACCACGATCAGTGAAATCGGTCCGAACCTGCTGGGACGGATACTGGAAATTAACGATACCCAGACCGGCATGCTTGAGA
TCGCCTTCAAGCTGGCGGACGATCAGGGTTTACTTCTGCTTGACCTCGACGACCTGCGTGCCTTGCTTGCTTTCGTCGCT
GAAAATCGCAAGGAGATTTCGACACAGTATGGCCTGGTAAGTTCACAATCCGTGGCTGCTGTCCAACGTGCCCTGTTGAC
GCTTCAGCGGGAAGGAGGGGAAGACCTCTTCGGCGAGCCGGCCCTGGAACTCAATGATTTGATGCGTACCGATCTCAACG
GCCGCGGTATCATCAACATTCTAGTTGCAGACCAGCTCATTTTAAGACCACGATTGTACTCGAGCTTCCTCCTGTGGCTG
CTGTCAGAGCTGTTCGAGAACCTGCCCGAGGTAGGTGACCTCGAAAAGCCCAAGCTTGTGTTCTTCTTCGATGAGGCCCA
CCTGCTCTTTGACGATGCGCCACCGATGATGCGTCAGCGAGTGGAACAGGTCGTGCGCATCATCCGATCCAAGGGCGTCG
GGGTCTACTTCTGCTCGCAATTCCCCGACGACGTGCCCAACGAGATCCTGGGCCAGCTCGGAAATCGCATCCAGCACGCA
CTTCGGGCCTACACTCCGCGTGACCAGAAGGCAGTGAAAACTGCCGCGGAAACCTTCGTTGCGAACCCGAAACTCAACGT
CGCGGAAGTCATATCACAACTCGGTGTTGGTGAAGCTCTGGTCTCCACTCTCCAGGAGAAGGGTGTTCCGATGCCGGTGG
AGCGAACGTTGATCTGTCCACCGCGCTGCCGGATGGGCGCTGTCACGCCTGAAGAGCGCTTGGCCGTGCGTTCGCGCAGC
CCGCTGGGAAACAAGTACGACTCGTCGGTGAACAGGGAATCTGCCTACGAGATCCTGAAACGGCGGACATTGGAAAGGGA
AACAGCAGAGGCGGAATCAGATCAGGCGCAGAAGGAGAAACCGTCTGAAGGTCAGGGGGGGGTTAATGAATGGCTGTGGG
GAACAAAACGTCGGCAGGGCATGGTTGAAACCATGGCTAAACAGGCCGCGCGTACCGTAGGAAGCCAGATCGGCCGCCAG
ATCCTGCGCGGTGTATTAGGCGTTATATTGGGCGAATCACGCCGTCGCTAG

Upstream 100 bases:

>100_bases
CTCAATTCGCATTCCGATTTCACTATGGGCGACAACAGGCTCCTATACCTTGGACAGCAAGTGGGCAGCCGACACTGTAT
CGTCACAGAGGAGGTAACGC

Downstream 100 bases:

>100_bases
TCTCCGCTCACTTTATCGACGCAAAGAGGCAGCCGAAAGGAAGCAAACCCAGCTGATTTTATCCATTTGGTTATTCCAAT
TGTCCTTGAATATAAATTGA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MNQILIGKGEQPVQLLARYGNRHGLIAGATGTGKTISLMVLAEGFSRMGVPVFMADVKGDVAGLAMAGTPNEKIQQRVKE
IGIDGYASEANPVLFWDVFGKNGHRVRTTISEIGPNLLGRILEINDTQTGMLEIAFKLADDQGLLLLDLDDLRALLAFVA
ENRKEISTQYGLVSSQSVAAVQRALLTLQREGGEDLFGEPALELNDLMRTDLNGRGIINILVADQLILRPRLYSSFLLWL
LSELFENLPEVGDLEKPKLVFFFDEAHLLFDDAPPMMRQRVEQVVRIIRSKGVGVYFCSQFPDDVPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVANPKLNVAEVISQLGVGEALVSTLQEKGVPMPVERTLICPPRCRMGAVTPEERLAVRSRS
PLGNKYDSSVNRESAYEILKRRTLERETAEAESDQAQKEKPSEGQGGVNEWLWGTKRRQGMVETMAKQAARTVGSQIGRQ
ILRGVLGVILGESRRR

Sequences:

>Translated_496_residues
MNQILIGKGEQPVQLLARYGNRHGLIAGATGTGKTISLMVLAEGFSRMGVPVFMADVKGDVAGLAMAGTPNEKIQQRVKE
IGIDGYASEANPVLFWDVFGKNGHRVRTTISEIGPNLLGRILEINDTQTGMLEIAFKLADDQGLLLLDLDDLRALLAFVA
ENRKEISTQYGLVSSQSVAAVQRALLTLQREGGEDLFGEPALELNDLMRTDLNGRGIINILVADQLILRPRLYSSFLLWL
LSELFENLPEVGDLEKPKLVFFFDEAHLLFDDAPPMMRQRVEQVVRIIRSKGVGVYFCSQFPDDVPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVANPKLNVAEVISQLGVGEALVSTLQEKGVPMPVERTLICPPRCRMGAVTPEERLAVRSRS
PLGNKYDSSVNRESAYEILKRRTLERETAEAESDQAQKEKPSEGQGGVNEWLWGTKRRQGMVETMAKQAARTVGSQIGRQ
ILRGVLGVILGESRRR
>Mature_496_residues
MNQILIGKGEQPVQLLARYGNRHGLIAGATGTGKTISLMVLAEGFSRMGVPVFMADVKGDVAGLAMAGTPNEKIQQRVKE
IGIDGYASEANPVLFWDVFGKNGHRVRTTISEIGPNLLGRILEINDTQTGMLEIAFKLADDQGLLLLDLDDLRALLAFVA
ENRKEISTQYGLVSSQSVAAVQRALLTLQREGGEDLFGEPALELNDLMRTDLNGRGIINILVADQLILRPRLYSSFLLWL
LSELFENLPEVGDLEKPKLVFFFDEAHLLFDDAPPMMRQRVEQVVRIIRSKGVGVYFCSQFPDDVPNEILGQLGNRIQHA
LRAYTPRDQKAVKTAAETFVANPKLNVAEVISQLGVGEALVSTLQEKGVPMPVERTLICPPRCRMGAVTPEERLAVRSRS
PLGNKYDSSVNRESAYEILKRRTLERETAEAESDQAQKEKPSEGQGGVNEWLWGTKRRQGMVETMAKQAARTVGSQIGRQ
ILRGVLGVILGESRRR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=495, Percent_Identity=53.7373737373737, Blast_Score=519, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 54795; Mature: 54795

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQILIGKGEQPVQLLARYGNRHGLIAGATGTGKTISLMVLAEGFSRMGVPVFMADVKGD
CCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEEHHHHHHCCCCEEEEECCCC
VAGLAMAGTPNEKIQQRVKEIGIDGYASEANPVLFWDVFGKNGHRVRTTISEIGPNLLGR
HHCEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHH
ILEINDTQTGMLEIAFKLADDQGLLLLDLDDLRALLAFVAENRKEISTQYGLVSSQSVAA
HHCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VQRALLTLQREGGEDLFGEPALELNDLMRTDLNGRGIINILVADQLILRPRLYSSFLLWL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
LSELFENLPEVGDLEKPKLVFFFDEAHLLFDDAPPMMRQRVEQVVRIIRSKGVGVYFCSQ
HHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCC
FPDDVPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVANPKLNVAEVISQLGVGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
VSTLQEKGVPMPVERTLICPPRCRMGAVTPEERLAVRSRSPLGNKYDSSVNRESAYEILK
HHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RRTLERETAEAESDQAQKEKPSEGQGGVNEWLWGTKRRQGMVETMAKQAARTVGSQIGRQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
ILRGVLGVILGESRRR
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNQILIGKGEQPVQLLARYGNRHGLIAGATGTGKTISLMVLAEGFSRMGVPVFMADVKGD
CCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEEEHHHHHHCCCCEEEEECCCC
VAGLAMAGTPNEKIQQRVKEIGIDGYASEANPVLFWDVFGKNGHRVRTTISEIGPNLLGR
HHCEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHH
ILEINDTQTGMLEIAFKLADDQGLLLLDLDDLRALLAFVAENRKEISTQYGLVSSQSVAA
HHCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VQRALLTLQREGGEDLFGEPALELNDLMRTDLNGRGIINILVADQLILRPRLYSSFLLWL
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
LSELFENLPEVGDLEKPKLVFFFDEAHLLFDDAPPMMRQRVEQVVRIIRSKGVGVYFCSQ
HHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCC
FPDDVPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVANPKLNVAEVISQLGVGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
VSTLQEKGVPMPVERTLICPPRCRMGAVTPEERLAVRSRSPLGNKYDSSVNRESAYEILK
HHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
RRTLERETAEAESDQAQKEKPSEGQGGVNEWLWGTKRRQGMVETMAKQAARTVGSQIGRQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH
ILRGVLGVILGESRRR
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]