Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is sarZ [H]

Identifier: 85859906

GI number: 85859906

Start: 2140888

End: 2141331

Strand: Direct

Name: sarZ [H]

Synonym: SYN_00652

Alternate gene names: 85859906

Gene position: 2140888-2141331 (Clockwise)

Preceding gene: 85859889

Following gene: 85859907

Centisome position: 67.34

GC content: 40.32

Gene sequence:

>444_bases
TTGGAAAAGGAGGATACATTGCCCTTTAACGATTGTATATGCTTTCAATTGGGTAAAACAGTACGCCAAATAACAAAAGC
ATACCGCAAAGAACTCAACTCTTATAATCTGACTCATGGACAATTTTTCATGATCATTGCCGTCATGGATGAGGAAGGAT
TATTGCCCAGCGAACTTGCCGACAAAACCGCACAGGACCGCGCAACTACAACAGGGCTTCTTGACCGTCTGGAAAAAGAT
GGATGGATTGAAAGAAAACCGGATTCAAAAGATCGCCGGTCTTTGCGCGTTTATCTGACATCTTACGGAAGGCATCACAA
AGAATCGATTTTAAAACTTTTTGAAGAAACCAATCACAAGTTTTTAAATCGTTTTACTCAAGATGAGTGGGTTCAGATGC
AGAATTTGCTTAACCGATTAGAACAACCAATGGCAAATACCTGA

Upstream 100 bases:

>100_bases
CTTTAATTATCATAAACAATGGCAATTCCTTTTACTGCTTGCCTTATAAATATAGTTTGCGTTTTAATTATATGCATGTT
AATTAAACATTAATTACAGG

Downstream 100 bases:

>100_bases
TTTCCTCCGATTTGATATCGTTATTAACATGAAGCAGATAACATTCTGAGTCTTGAGCAGTAGCAGGTGCAAGGTCTAAT
GCAGTTTTATGACGCTGCCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Staphylococcal accessory regulator Z [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD
GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT

Sequences:

>Translated_147_residues
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD
GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT
>Mature_147_residues
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELADKTAQDRATTTGLLDRLEKD
GWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHKFLNRFTQDEWVQMQNLLNRLEQPMANT

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17385; Mature: 17385

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHH
DKTAQDRATTTGLLDRLEKDGWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLNRFTQDEWVQMQNLLNRLEQPMANT
HHHHHCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKEDTLPFNDCICFQLGKTVRQITKAYRKELNSYNLTHGQFFMIIAVMDEEGLLPSELA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHH
DKTAQDRATTTGLLDRLEKDGWIERKPDSKDRRSLRVYLTSYGRHHKESILKLFEETNHK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLNRFTQDEWVQMQNLLNRLEQPMANT
HHHHHCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA