Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859882

Identifier: 85859882

GI number: 85859882

Start: 2114849

End: 2116063

Strand: Direct

Name: 85859882

Synonym: SYN_00495

Alternate gene names: NA

Gene position: 2114849-2116063 (Clockwise)

Preceding gene: 85859881

Following gene: 85859883

Centisome position: 66.52

GC content: 35.47

Gene sequence:

>1215_bases
ATGGAAATAAAAACTTCGGCAATACCAAGCGACTGGAAAATGATGACGTTAGGACAAGTAGGTGTTACCGTCACAGGCAA
AACCCCATCAAAAGATAATCCCGAAGATTGGGGCGATTTATTAAGTTTTATTACTCCTACTGATATTATATCTGATTCAA
AGCACCTGAAGACTGTCGCAAGGAAATTATCGGGAAGCGGAATAAATACGCTTAAAAAAATGATCATTCCCGCCGGTTCA
GTTGTTGTGACTTGCATTGGTTCTGATATGGGTAAAGTTGTCATTAATAGTTATGACTCAGTTACTAACCAGCAAATCAA
TTCAATTAAAGTTAATGATAACAACAACAAAGATTTTGTTTATTATCTGCTGAAGAATTCATATTCCATCTTACGAAACC
ACGCCATTGGTGGTTCAACAATGCCAATATTAAATAAATCAACTTTTGAATCGTTGGAATTCATTTTTCCTTCCCTAACT
GAACAACAGGCGATTGCAGCGGCGTTATCTTCTTTGGATGATAAAATAGAGCTCTTGCGAACACAAAACAAGACACTTGA
AAATATCACTCAGACCATTTTTAAACATTGGTTTGTAGATTTTGAATTTCCTGGCAAAGACGGAAATCCATATAAATCCA
GCGGCGGGAAAATGATTGAATCCGCGCTCGGAAAAATCCCGAATAATTGGAGAATTGGGAAATACGAAGATGTAGTTGAT
GTTGTAACCGGGAAAGGAATGAAGAAAGACAATTTAAGGAGCAATGGCCTATATAAAGTATTAGGAGCTAATGGTGAAAT
AGGAAAAACGGATGAATATTTATTTGACGAAGACCTTATATTAACGGGTAGAGTTGGAACTTTAGGGACGATTTTTATTT
CCAGAGGCAAAGTTTGGATTTCTGACAATGTTTTAATTTCAAAACCAAAATCTGATGAGAATTGCTATTTTGCATATTTC
CAATTACGTAAACTCAATTTGGAAAGCCTGAATCGCGGAAGTACTCAGCCTTTGATTACGCAAACAGACTTGAAAAACGT
TGAAATAATATTGCCTCCAAAAGAGATCCTTTTTGACTGGCACTGTATGGCTTCAAGTTTATTTACAAAAATATTTAATA
ACGATTTTCAAATCAACACTCTTTCAAAAATCCGCGATACTCTCTTACCCAAACTGATGAAAGGAGAAATAAGAGTAGCT
AGTTTCAATAATTAA

Upstream 100 bases:

>100_bases
GATATCTCAGTGAGCTTTCAATACAGATGGCGGAAGAAAAGAGACTGGATGAAGAAATAAAAAAGCAGCTCGGTAATATC
GGGCTTAAATTGAAATAACC

Downstream 100 bases:

>100_bases
TTATGCAGAAATTACACATCACGTTCGAAAATTGTTACGGGATAAAGAGACTAGAAAAAGAGTTTAATTTTTCAAGGAAA
AACACTTTTGCGATTTATGC

Product: type I restriction-modification system specificity subunit

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MEIKTSAIPSDWKMMTLGQVGVTVTGKTPSKDNPEDWGDLLSFITPTDIISDSKHLKTVARKLSGSGINTLKKMIIPAGS
VVVTCIGSDMGKVVINSYDSVTNQQINSIKVNDNNNKDFVYYLLKNSYSILRNHAIGGSTMPILNKSTFESLEFIFPSLT
EQQAIAAALSSLDDKIELLRTQNKTLENITQTIFKHWFVDFEFPGKDGNPYKSSGGKMIESALGKIPNNWRIGKYEDVVD
VVTGKGMKKDNLRSNGLYKVLGANGEIGKTDEYLFDEDLILTGRVGTLGTIFISRGKVWISDNVLISKPKSDENCYFAYF
QLRKLNLESLNRGSTQPLITQTDLKNVEIILPPKEILFDWHCMASSLFTKIFNNDFQINTLSKIRDTLLPKLMKGEIRVA
SFNN

Sequences:

>Translated_404_residues
MEIKTSAIPSDWKMMTLGQVGVTVTGKTPSKDNPEDWGDLLSFITPTDIISDSKHLKTVARKLSGSGINTLKKMIIPAGS
VVVTCIGSDMGKVVINSYDSVTNQQINSIKVNDNNNKDFVYYLLKNSYSILRNHAIGGSTMPILNKSTFESLEFIFPSLT
EQQAIAAALSSLDDKIELLRTQNKTLENITQTIFKHWFVDFEFPGKDGNPYKSSGGKMIESALGKIPNNWRIGKYEDVVD
VVTGKGMKKDNLRSNGLYKVLGANGEIGKTDEYLFDEDLILTGRVGTLGTIFISRGKVWISDNVLISKPKSDENCYFAYF
QLRKLNLESLNRGSTQPLITQTDLKNVEIILPPKEILFDWHCMASSLFTKIFNNDFQINTLSKIRDTLLPKLMKGEIRVA
SFNN
>Mature_404_residues
MEIKTSAIPSDWKMMTLGQVGVTVTGKTPSKDNPEDWGDLLSFITPTDIISDSKHLKTVARKLSGSGINTLKKMIIPAGS
VVVTCIGSDMGKVVINSYDSVTNQQINSIKVNDNNNKDFVYYLLKNSYSILRNHAIGGSTMPILNKSTFESLEFIFPSLT
EQQAIAAALSSLDDKIELLRTQNKTLENITQTIFKHWFVDFEFPGKDGNPYKSSGGKMIESALGKIPNNWRIGKYEDVVD
VVTGKGMKKDNLRSNGLYKVLGANGEIGKTDEYLFDEDLILTGRVGTLGTIFISRGKVWISDNVLISKPKSDENCYFAYF
QLRKLNLESLNRGSTQPLITQTDLKNVEIILPPKEILFDWHCMASSLFTKIFNNDFQINTLSKIRDTLLPKLMKGEIRVA
SFNN

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 45091; Mature: 45091

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKTSAIPSDWKMMTLGQVGVTVTGKTPSKDNPEDWGDLLSFITPTDIISDSKHLKTVA
CCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHH
RKLSGSGINTLKKMIIPAGSVVVTCIGSDMGKVVINSYDSVTNQQINSIKVNDNNNKDFV
HHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHEECCCHHHCCCCCCEEEECCCCCCEEE
YYLLKNSYSILRNHAIGGSTMPILNKSTFESLEFIFPSLTEQQAIAAALSSLDDKIELLR
EEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TQNKTLENITQTIFKHWFVDFEFPGKDGNPYKSSGGKMIESALGKIPNNWRIGKYEDVVD
HCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
VVTGKGMKKDNLRSNGLYKVLGANGEIGKTDEYLFDEDLILTGRVGTLGTIFISRGKVWI
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEECCCCCEEEEEEECCEEEE
SDNVLISKPKSDENCYFAYFQLRKLNLESLNRGSTQPLITQTDLKNVEIILPPKEILFDW
ECCEEEECCCCCCCEEEEEEEEECCCHHHCCCCCCCCEEEECCCCCEEEEECCHHHHHHH
HCMASSLFTKIFNNDFQINTLSKIRDTLLPKLMKGEIRVASFNN
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MEIKTSAIPSDWKMMTLGQVGVTVTGKTPSKDNPEDWGDLLSFITPTDIISDSKHLKTVA
CCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHH
RKLSGSGINTLKKMIIPAGSVVVTCIGSDMGKVVINSYDSVTNQQINSIKVNDNNNKDFV
HHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHEECCCHHHCCCCCCEEEECCCCCCEEE
YYLLKNSYSILRNHAIGGSTMPILNKSTFESLEFIFPSLTEQQAIAAALSSLDDKIELLR
EEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TQNKTLENITQTIFKHWFVDFEFPGKDGNPYKSSGGKMIESALGKIPNNWRIGKYEDVVD
HCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
VVTGKGMKKDNLRSNGLYKVLGANGEIGKTDEYLFDEDLILTGRVGTLGTIFISRGKVWI
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEECCCCCEEEEEEECCEEEE
SDNVLISKPKSDENCYFAYFQLRKLNLESLNRGSTQPLITQTDLKNVEIILPPKEILFDW
ECCEEEECCCCCCCEEEEEEEEECCCHHHCCCCCCCCEEEECCCCCEEEEECCHHHHHHH
HCMASSLFTKIFNNDFQINTLSKIRDTLLPKLMKGEIRVASFNN
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]