| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is gpmI [H]
Identifier: 85859816
GI number: 85859816
Start: 2054715
End: 2056313
Strand: Direct
Name: gpmI [H]
Synonym: SYN_01002
Alternate gene names: 85859816
Gene position: 2054715-2056313 (Clockwise)
Preceding gene: 85859807
Following gene: 85859817
Centisome position: 64.63
GC content: 53.41
Gene sequence:
>1599_bases ATGCAGATGAATAAGGAAGCAATCGGAAATACCATGTCCCAGGCTGTCAGAAATGCTTATCGGCGGAATTGCGAAGACGA AACCATGGAACCTCTTGTTCTGGTGGATACGGAGAAACGGCCAGTAGGCCGTATCCGGAAAAACGATGCCGTCATCTTCT ACAATATCCGGGGAGAACGCGAAATCGAGCTGACACGCAGCCTCACCGAAAAGGGCTTTCAATCCTTTCACCCGGTGACC GATTTGTCCCTGTCCTTTGCCACGATGATCGAATACCGGCAGGGATTAAATGTTCAGGTAGCCCATCCGCCGGAAGGCGA GGTGCAGGATACTCTCAGCGCTGTTCTCGCGTGGCACGGCATGAAGCAGGCCAAGATCACCGAAGCGGAAAAAGCGGTCC ATGTGACCTATTTTCTCAATGGAAAGAAAGAAAGCCCGCTTCCGAAAGAAGAACGCATCATCGTCCCGACACGCAAGGAT GTTCGCCTCTTTGATGAAGCCCCGGAGATGTCCATCGAAAAGATATCCCGGGAAATTATCGAGAAAATTCACGATCCCTC CTGCCGCTTCATTTTTGCGAATTTTCCCAATGTGGATGTCGTCGGGCATATCGAAAATGAACAGGCCATTCTCAGGGCGG TGGAAGCAGTCGACCGGCACGCTGGCCTGGTCCTTGATGAGGCCCGGCGGCAGGGTTTGACTGTGATGGTTACCGCCGAC CATGGCACTGTGGAAAAATGGCTTTATCCTGACGGTGTCATCGACACGGGTCATACTGACAGTCCCGTCCCTTTTATTCT CATTCATGACTCCCCGGCTATGAAACTCCGCCGGGACGGCGCACTGACGGACATCGCCCCGACGGTTCTTCAACTCTTTC ATCTCCCGGTCCCTTCTGTCATGACCGGACGATCGCTGATCACCCATCCCGCTCCGGAACAAATCCGGGAAGCGCAACGC CTGCTTCTCCTGATCCTCGATGGTTGGGGTGAAAGCTCTCCCAGTGAGGGCAATCTGATCTCCCGGGCCGCTACACCGAC CATGGATTTTCTGAAAAAATCCTTTCCCTGGACGACTCTGAAAGCTTCCGGTGAAGCTGTCGGACTGCCCCCCGGCACCG TCGGCAATTCTGAAGCCGGCCATCTTCATATCGGCGCCGGCAGGCAGATTTACGCGGATCGGGTCCGCATCAACCGGGCC ATTGAGGACGGAGCTTTTTTTGAAAACGAGGCATTCCTCAACGTCATGCGCGCAGCAAAGCAGAACGGAAAGGCCCTTCA TCTCATGGGCATCGTTTCTTTTTTCAGTTCCCACGGCTCCATCCATCATCTCTTCGCACTGATGGAACTGGCAAAGCGGG AAAATGTTCCTGAAGTCTACATTCATGCCATGCTCGGCAGGCGGGGTGAAATGCCGGAAAGTGGCGCTCTGTATGTTGAA AAGATAGAAAGCAAGGCAGCGGAAATTCAAAAAGGCAGGGTGGTTTCGGTCATAGGCCGATACTGGTCCATGGACCGGGA AGAAAACTGGGACCGCATCAAAAAAACTTATGATATGCTGGTTTTTGGGAGGGGAACACCGGTATCCTGTCAACTTTGA
Upstream 100 bases:
>100_bases AACCTCTTAATTTTCAACTGAAAAGGCAGGCGCCTTCCTTCATCATTTTTACTTTACATTGAATTCCTCTTTAGTTAGGT AACAAGACGAAAGGAAGGAG
Downstream 100 bases:
>100_bases TAACAGAATAAGTCGGCTGCCTGCCGAAACACCGACAGGGAGGAAGAAAATGGAGGCTCGGATTGGGAACAGCGTTCTGG CCCTGATTCAGGGGGATATA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MQMNKEAIGNTMSQAVRNAYRRNCEDETMEPLVLVDTEKRPVGRIRKNDAVIFYNIRGEREIELTRSLTEKGFQSFHPVT DLSLSFATMIEYRQGLNVQVAHPPEGEVQDTLSAVLAWHGMKQAKITEAEKAVHVTYFLNGKKESPLPKEERIIVPTRKD VRLFDEAPEMSIEKISREIIEKIHDPSCRFIFANFPNVDVVGHIENEQAILRAVEAVDRHAGLVLDEARRQGLTVMVTAD HGTVEKWLYPDGVIDTGHTDSPVPFILIHDSPAMKLRRDGALTDIAPTVLQLFHLPVPSVMTGRSLITHPAPEQIREAQR LLLLILDGWGESSPSEGNLISRAATPTMDFLKKSFPWTTLKASGEAVGLPPGTVGNSEAGHLHIGAGRQIYADRVRINRA IEDGAFFENEAFLNVMRAAKQNGKALHLMGIVSFFSSHGSIHHLFALMELAKRENVPEVYIHAMLGRRGEMPESGALYVE KIESKAAEIQKGRVVSVIGRYWSMDREENWDRIKKTYDMLVFGRGTPVSCQL
Sequences:
>Translated_532_residues MQMNKEAIGNTMSQAVRNAYRRNCEDETMEPLVLVDTEKRPVGRIRKNDAVIFYNIRGEREIELTRSLTEKGFQSFHPVT DLSLSFATMIEYRQGLNVQVAHPPEGEVQDTLSAVLAWHGMKQAKITEAEKAVHVTYFLNGKKESPLPKEERIIVPTRKD VRLFDEAPEMSIEKISREIIEKIHDPSCRFIFANFPNVDVVGHIENEQAILRAVEAVDRHAGLVLDEARRQGLTVMVTAD HGTVEKWLYPDGVIDTGHTDSPVPFILIHDSPAMKLRRDGALTDIAPTVLQLFHLPVPSVMTGRSLITHPAPEQIREAQR LLLLILDGWGESSPSEGNLISRAATPTMDFLKKSFPWTTLKASGEAVGLPPGTVGNSEAGHLHIGAGRQIYADRVRINRA IEDGAFFENEAFLNVMRAAKQNGKALHLMGIVSFFSSHGSIHHLFALMELAKRENVPEVYIHAMLGRRGEMPESGALYVE KIESKAAEIQKGRVVSVIGRYWSMDREENWDRIKKTYDMLVFGRGTPVSCQL >Mature_532_residues MQMNKEAIGNTMSQAVRNAYRRNCEDETMEPLVLVDTEKRPVGRIRKNDAVIFYNIRGEREIELTRSLTEKGFQSFHPVT DLSLSFATMIEYRQGLNVQVAHPPEGEVQDTLSAVLAWHGMKQAKITEAEKAVHVTYFLNGKKESPLPKEERIIVPTRKD VRLFDEAPEMSIEKISREIIEKIHDPSCRFIFANFPNVDVVGHIENEQAILRAVEAVDRHAGLVLDEARRQGLTVMVTAD HGTVEKWLYPDGVIDTGHTDSPVPFILIHDSPAMKLRRDGALTDIAPTVLQLFHLPVPSVMTGRSLITHPAPEQIREAQR LLLLILDGWGESSPSEGNLISRAATPTMDFLKKSFPWTTLKASGEAVGLPPGTVGNSEAGHLHIGAGRQIYADRVRINRA IEDGAFFENEAFLNVMRAAKQNGKALHLMGIVSFFSSHGSIHHLFALMELAKRENVPEVYIHAMLGRRGEMPESGALYVE KIESKAAEIQKGRVVSVIGRYWSMDREENWDRIKKTYDMLVFGRGTPVSCQL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=205, Percent_Identity=42.9268292682927, Blast_Score=179, Evalue=3e-46, Organism=Caenorhabditis elegans, GI32564249, Length=209, Percent_Identity=42.1052631578947, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17507741, Length=209, Percent_Identity=42.1052631578947, Blast_Score=168, Evalue=7e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 59636; Mature: 59636
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMNKEAIGNTMSQAVRNAYRRNCEDETMEPLVLVDTEKRPVGRIRKNDAVIFYNIRGER CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEEECCCC EIELTRSLTEKGFQSFHPVTDLSLSFATMIEYRQGLNVQVAHPPEGEVQDTLSAVLAWHG CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCC MKQAKITEAEKAVHVTYFLNGKKESPLPKEERIIVPTRKDVRLFDEAPEMSIEKISREII CCHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH EKIHDPSCRFIFANFPNVDVVGHIENEQAILRAVEAVDRHAGLVLDEARRQGLTVMVTAD HHHCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEHHHHCCCEEEEECC HGTVEKWLYPDGVIDTGHTDSPVPFILIHDSPAMKLRRDGALTDIAPTVLQLFHLPVPSV CCCHHHEECCCCCEECCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCH MTGRSLITHPAPEQIREAQRLLLLILDGWGESSPSEGNLISRAATPTMDFLKKSFPWTTL HCCCHHHCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEE KASGEAVGLPPGTVGNSEAGHLHIGAGRQIYADRVRINRAIEDGAFFENEAFLNVMRAAK ECCCCEECCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QNGKALHLMGIVSFFSSHGSIHHLFALMELAKRENVPEVYIHAMLGRRGEMPESGALYVE CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHH KIESKAAEIQKGRVVSVIGRYWSMDREENWDRIKKTYDMLVFGRGTPVSCQL HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCEECC >Mature Secondary Structure MQMNKEAIGNTMSQAVRNAYRRNCEDETMEPLVLVDTEKRPVGRIRKNDAVIFYNIRGER CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCEEEEEEECCCC EIELTRSLTEKGFQSFHPVTDLSLSFATMIEYRQGLNVQVAHPPEGEVQDTLSAVLAWHG CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCC MKQAKITEAEKAVHVTYFLNGKKESPLPKEERIIVPTRKDVRLFDEAPEMSIEKISREII CCHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH EKIHDPSCRFIFANFPNVDVVGHIENEQAILRAVEAVDRHAGLVLDEARRQGLTVMVTAD HHHCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEHHHHCCCEEEEECC HGTVEKWLYPDGVIDTGHTDSPVPFILIHDSPAMKLRRDGALTDIAPTVLQLFHLPVPSV CCCHHHEECCCCCEECCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHCCCCCH MTGRSLITHPAPEQIREAQRLLLLILDGWGESSPSEGNLISRAATPTMDFLKKSFPWTTL HCCCHHHCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEE KASGEAVGLPPGTVGNSEAGHLHIGAGRQIYADRVRINRAIEDGAFFENEAFLNVMRAAK ECCCCEECCCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QNGKALHLMGIVSFFSSHGSIHHLFALMELAKRENVPEVYIHAMLGRRGEMPESGALYVE CCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHH KIESKAAEIQKGRVVSVIGRYWSMDREENWDRIKKTYDMLVFGRGTPVSCQL HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA