| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is ktrB [H]
Identifier: 85859691
GI number: 85859691
Start: 1919441
End: 1920811
Strand: Direct
Name: ktrB [H]
Synonym: SYN_01091
Alternate gene names: 85859691
Gene position: 1919441-1920811 (Clockwise)
Preceding gene: 85859686
Following gene: 85859692
Centisome position: 60.37
GC content: 49.96
Gene sequence:
>1371_bases ATGAGACTGACGGCATTGCAACTTAAAATGTCCATATCCGGTTATCTGACGCCGGCAAGAAGCTTTATTTTGAGTTTTGC CGCCGTTATCCTGGCTGGAACACTGCTGCTCTGGTCGCCCTTTTCCTCGAGCGGTAAACCCCTGAGTTTTATCGACGCCC TCTTTACCTCTGCCTCCGCGGTCTGCGTAACGGGACTGGCCGTCGTCGATATCGGCAGGGATCTGTCTCTTCCCGGACAA CTCATTACCCTTCTGCTCTTTCAGATCGGTGGATTGGGGATCATTACCTTTTCCGTGCTTTTCTTCGGAATTATGGGACG GGGTATATCCTTCCGCGGGCGGGAGATTGTCCAGTCGACTTTTCTCCATACCCCCCGACGGGATTTTTTTATGATCCTCA AGTGGGTTTTGCTCATGACCCTGATTATCGAATCCATAGGAACACTCTTGCTGTTTTCCCGTTTCATTCAGGATTTTCCT CTTCCCAGGGCCTTGTATCTTTCTGTTTATCACGCGGTGTCCGCCTTCAATAACTGCGGATATTCCCTCTTTTCCAACAG TCTTATGGATTATCGCTCCGACTGGATCGTCAATTTGACGATAATGAGTCTGATTGTGCTGGGCGGTATCGGATTTATTG TCCTCTATGAGATCATTTCCAGAGTGCGGGGTAATCAGAAAAAACTATCCCTGCACAGCCGGATCGCCCTTTTGATGACC GGCTTTCTCATTCTTCTTGGAGCTGTTCTGTTTTACTTTTTTGAAATGCATCATGTTCTAAGGGGGGCATCCTGGCAGGA AAATCTGCTGGTTTCACTTTTTCAGTCGGTGACATCCCGAACGAGCGGCTTCAATACGGTGGATATCGGTCAACTGACAA ATGCCACGATCCTGCTGTTAATGGGCCTTATGTTCATCGGCGCTTCTCCGGGTTCAACGGGGGGAGGCATCAAGACCACA AGCTTTACCCTGCTGCTGATGATGATCTGGAACCGTATCCAGGGGAGCGAACAGGTGACCATCTTCAACCGCAGCATCCC CGAAGAAATTACGACCCGCACGATTTCCATTGTTTTTGCCTCAGCCTTTTCCGTCGCGCTGATCTCATCGATTCTTCTTT TCGGAAGCCCGGACTCTCTCCCCCCGGCAAGCAGCCGGCACTTATTTGTGGAGTATGTCTTTGAAACCGTTTCAGCCTAT GGAACGGTGGGGCTGTCCATGGGAATAACGGCAAAACTGAGTGAACTCCAGAAACTGGCTATAATCCTCATGATGTTTGC GGGGCGTGTCGGTCCCCTGACCCTCGCCTTTGCCTGGAGTAAATCGAAAAGGAAAATCATCTATGCGGAAGAATCCGTGA TGGTGGGATAA
Upstream 100 bases:
>100_bases CCGCGTCATCCGGGAATAATGATTCCAACCCTCACAGTCGGCCGTTCAGCGGTTTATTGCTTCTCCCTTCCTGTATGCCG GGTGTTTCCGAGGTTGCTCA
Downstream 100 bases:
>100_bases GGAGGAAGCATGGGAACGAAACGGGTTGTCGTTATCGGATTGGGCATCTTCGGCTTCAACATCGTAAAGGATCTTTATGA AGTCGGTTTCGATGTGATCG
Product: potassium uptake protein
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRLTALQLKMSISGYLTPARSFILSFAAVILAGTLLLWSPFSSSGKPLSFIDALFTSASAVCVTGLAVVDIGRDLSLPGQ LITLLLFQIGGLGIITFSVLFFGIMGRGISFRGREIVQSTFLHTPRRDFFMILKWVLLMTLIIESIGTLLLFSRFIQDFP LPRALYLSVYHAVSAFNNCGYSLFSNSLMDYRSDWIVNLTIMSLIVLGGIGFIVLYEIISRVRGNQKKLSLHSRIALLMT GFLILLGAVLFYFFEMHHVLRGASWQENLLVSLFQSVTSRTSGFNTVDIGQLTNATILLLMGLMFIGASPGSTGGGIKTT SFTLLLMMIWNRIQGSEQVTIFNRSIPEEITTRTISIVFASAFSVALISSILLFGSPDSLPPASSRHLFVEYVFETVSAY GTVGLSMGITAKLSELQKLAIILMMFAGRVGPLTLAFAWSKSKRKIIYAEESVMVG
Sequences:
>Translated_456_residues MRLTALQLKMSISGYLTPARSFILSFAAVILAGTLLLWSPFSSSGKPLSFIDALFTSASAVCVTGLAVVDIGRDLSLPGQ LITLLLFQIGGLGIITFSVLFFGIMGRGISFRGREIVQSTFLHTPRRDFFMILKWVLLMTLIIESIGTLLLFSRFIQDFP LPRALYLSVYHAVSAFNNCGYSLFSNSLMDYRSDWIVNLTIMSLIVLGGIGFIVLYEIISRVRGNQKKLSLHSRIALLMT GFLILLGAVLFYFFEMHHVLRGASWQENLLVSLFQSVTSRTSGFNTVDIGQLTNATILLLMGLMFIGASPGSTGGGIKTT SFTLLLMMIWNRIQGSEQVTIFNRSIPEEITTRTISIVFASAFSVALISSILLFGSPDSLPPASSRHLFVEYVFETVSAY GTVGLSMGITAKLSELQKLAIILMMFAGRVGPLTLAFAWSKSKRKIIYAEESVMVG >Mature_456_residues MRLTALQLKMSISGYLTPARSFILSFAAVILAGTLLLWSPFSSSGKPLSFIDALFTSASAVCVTGLAVVDIGRDLSLPGQ LITLLLFQIGGLGIITFSVLFFGIMGRGISFRGREIVQSTFLHTPRRDFFMILKWVLLMTLIIESIGTLLLFSRFIQDFP LPRALYLSVYHAVSAFNNCGYSLFSNSLMDYRSDWIVNLTIMSLIVLGGIGFIVLYEIISRVRGNQKKLSLHSRIALLMT GFLILLGAVLFYFFEMHHVLRGASWQENLLVSLFQSVTSRTSGFNTVDIGQLTNATILLLMGLMFIGASPGSTGGGIKTT SFTLLLMMIWNRIQGSEQVTIFNRSIPEEITTRTISIVFASAFSVALISSILLFGSPDSLPPASSRHLFVEYVFETVSAY GTVGLSMGITAKLSELQKLAIILMMFAGRVGPLTLAFAWSKSKRKIIYAEESVMVG
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 50061; Mature: 50061
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTALQLKMSISGYLTPARSFILSFAAVILAGTLLLWSPFSSSGKPLSFIDALFTSASA CCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHH VCVTGLAVVDIGRDLSLPGQLITLLLFQIGGLGIITFSVLFFGIMGRGISFRGREIVQST HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FLHTPRRDFFMILKWVLLMTLIIESIGTLLLFSRFIQDFPLPRALYLSVYHAVSAFNNCG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC YSLFSNSLMDYRSDWIVNLTIMSLIVLGGIGFIVLYEIISRVRGNQKKLSLHSRIALLMT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GFLILLGAVLFYFFEMHHVLRGASWQENLLVSLFQSVTSRTSGFNTVDIGQLTNATILLL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH MGLMFIGASPGSTGGGIKTTSFTLLLMMIWNRIQGSEQVTIFNRSIPEEITTRTISIVFA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH SAFSVALISSILLFGSPDSLPPASSRHLFVEYVFETVSAYGTVGLSMGITAKLSELQKLA HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IILMMFAGRVGPLTLAFAWSKSKRKIIYAEESVMVG HHHHHHHCCCCCEEEEEEECCCCCEEEEECCCEECC >Mature Secondary Structure MRLTALQLKMSISGYLTPARSFILSFAAVILAGTLLLWSPFSSSGKPLSFIDALFTSASA CCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHH VCVTGLAVVDIGRDLSLPGQLITLLLFQIGGLGIITFSVLFFGIMGRGISFRGREIVQST HHHHHHHHEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FLHTPRRDFFMILKWVLLMTLIIESIGTLLLFSRFIQDFPLPRALYLSVYHAVSAFNNCG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC YSLFSNSLMDYRSDWIVNLTIMSLIVLGGIGFIVLYEIISRVRGNQKKLSLHSRIALLMT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GFLILLGAVLFYFFEMHHVLRGASWQENLLVSLFQSVTSRTSGFNTVDIGQLTNATILLL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH MGLMFIGASPGSTGGGIKTTSFTLLLMMIWNRIQGSEQVTIFNRSIPEEITTRTISIVFA HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH SAFSVALISSILLFGSPDSLPPASSRHLFVEYVFETVSAYGTVGLSMGITAKLSELQKLA HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IILMMFAGRVGPLTLAFAWSKSKRKIIYAEESVMVG HHHHHHHCCCCCEEEEEEECCCCCEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]