| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859681
Identifier: 85859681
GI number: 85859681
Start: 1910434
End: 1911372
Strand: Direct
Name: 85859681
Synonym: SYN_01082
Alternate gene names: NA
Gene position: 1910434-1911372 (Clockwise)
Preceding gene: 85859680
Following gene: 85859682
Centisome position: 60.09
GC content: 47.71
Gene sequence:
>939_bases ATGACAGAGCGCATACAAGCCGCGGACGATCTTCTTCTCAGATGGCATGAGCTGGAGCGTCACACTGAACGGCTGAAAAA TGATCTGATCCGGATGGATACGGATATAGACCTTAAAAAGGCCGAGTCAGCCTATGCGTCGCTGATGCGTCTGTATGTTA TGCAGCTTTCTTTGCGGGCGCAGGCGGAAGACATTATTCAAACAATTCCGGATTACGATCCGGATTATGAACTGGCATCA GAAATTCGAATCCTTATTGCGCTCATCGAAATTCTTTTCTCACCGAGATTTGACATAACAGGAAAATATGGGAAAAGCGT GGCTGAGGCATTTCGCGACTCAGGAATTCCCTTATCCCGCCAGCTCGCATTCCTGGTTCTGGCGGCATTTTGCGAACTGT ATCTGCAGCATGCCAAAAATAAAAATGCCATATTTCCGCTGAACGAATGGCTCTGCTTCAAATCAGTATGCGCTCAGTGC CTGTCTGATTATCTGGATTGCATCGATCAAATCTGTTCTGTCTATGATCAGCATTTGTCATTCAGCAAAGATTTGGCGTC CCATGAAGAAATCACCCTGGCCCTCAAGGAACTCGTCAAGATTGGCTGGGAGAGACACCAGGGCCTCCGGATAGCAAAAT TTCTGTATCAGCGTGCACATGGGCAGGAAACGGAGGAGGACGAACGCGTATTGTCAGAAGAGGTGCGAAACAATTTAGCG AAGTTCAACATTCGCCTCAAACGAAGGATGAAGCTTACCTGCATAACAGGCTTCGTTTCCGGATATTGCACGGAACGTGG CTGCCCGAAGCGTTTTGTTGTACAGGCGGAGATTCGCAATCAGTTGAGAGCGCTTGAACCGGCCATCTGTCCGGAATGTG GTATTGCAATCATCCCCGAGAAAATCATGACAATCCTAAAAGGTGAACTCAAAGAGTAA
Upstream 100 bases:
>100_bases GGAACAAACGGGAATCAAAGGCTGTGATAGCCATAGATTAAAATCGATAAATTTTTGTCATGGATTTTTTACAGTTATAC TCATATGTGCTGAGCAAACA
Downstream 100 bases:
>100_bases GTTTCCGTCAATCATTGAATTTTCGTAACTGAAAGTTACTCTGTCCCTATATGGTTATCTCCGGGCAAATGTAAAAATAG AGAGGCCTGAAATTCAACTT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELAS EIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQC LSDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE
Sequences:
>Translated_312_residues MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELAS EIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQC LSDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE >Mature_311_residues TERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRAQAEDIIQTIPDYDPDYELASE IRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSRQLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCL SDYLDCIDQICSVYDQHLSFSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLAK FNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPEKIMTILKGELKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36047; Mature: 35916
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QAEDIIQTIPDYDPDYELASEIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHH QLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCLSDYLDCIDQICSVYDQHLS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH KIMTILKGELKE HHHHHHHHHCCC >Mature Secondary Structure TERIQAADDLLLRWHELERHTERLKNDLIRMDTDIDLKKAESAYASLMRLYVMQLSLRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QAEDIIQTIPDYDPDYELASEIRILIALIEILFSPRFDITGKYGKSVAEAFRDSGIPLSR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHH QLAFLVLAAFCELYLQHAKNKNAIFPLNEWLCFKSVCAQCLSDYLDCIDQICSVYDQHLS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSKDLASHEEITLALKELVKIGWERHQGLRIAKFLYQRAHGQETEEDERVLSEEVRNNLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KFNIRLKRRMKLTCITGFVSGYCTERGCPKRFVVQAEIRNQLRALEPAICPECGIAIIPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH KIMTILKGELKE HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA