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The map label for this gene is yliI [C]

Identifier: 85859655

GI number: 85859655

Start: 1884887

End: 1886143

Strand: Direct

Name: yliI [C]

Synonym: SYN_01932

Alternate gene names: 85859655

Gene position: 1884887-1886143 (Clockwise)

Preceding gene: 85859654

Following gene: 85859671

Centisome position: 59.29

GC content: 52.67

Gene sequence:

>1257_bases
TTGTTTTCTTCCGGGTTGAATCATAAGATGATCGACTCAGTAAGGAGAATGAAGATGAACGGGAAACGGGTTCTTGCGAC
CGGCCATGCCATGAGAAAAGCGCTTTGCATCCTTTTAATCCTTCATCTTTCTGCGGCAACGGCTTCATGCACACAGCAGC
AGACTGGCGGAAAACCGCAGGCCGTGGAGGATGTCTTTCTTCCCGATGGCGATGGAATCAAGGTCGAGGTCTGGGTCGAA
AACCTGAACGTGCCCTGGTCCCTGGTCTTTCTTCCCGACAAAAGGGCTCTCGTCAGTGAAAGATCAGGGAAAATACGTCT
GATCATCAATGGAAAGCTGGAGTCGCATCCTTATGCGACGGTTGACGCGGTACGGATCGGCGAGGCCGGCCTTATGGGAC
TTGCCATGCACCCGCGGTTTCCGGCAGAACCTTATATCTACGCCATGTATACGGAGCAGAAAAAAGGAGCTCTGCGAAAT
CGCGTCGTCCGATTTCGTGATCACGGCAGGACAGGAAGTTTCGACAGGGTCATTCTCGACGATATTCCCGGCGGGAGATT
CCATGACGGTGGACGGATCGCCTTCGGACCGGACGGGATGCTTTATGTGACAACCGGAGAGAATTTCAATGCCGATTTAG
CCCAGGACAGATCATCCCTCGCCGGAAAAATTCTGCGGATAAGCCCGGATGGAGAAATTCCTGCGGATAATCCCTTTAAA
GATTCACCCGTCTATTCTTACGGCCACAGAAATCCTCAGGGGCTTGCCTGGCAGCCGGAAACAGGCAGGCTTTTCGAATC
CGAGCACGGACCGTCCGGGGAATTTGCCCATTTTGGGCATGATGAGATCAACAGGATCGTCAAGGGAGGCAATTACGGCT
GGCCCCTCGTTATCGGCGCACCGGAGATTCAACCATACATCGATCCCCTTATTGTCTGGAAGGAAGCCACTCCGCCCGGG
GGCATTGCCTTTTACAACGGGACGTTTCTTCCTCATCTGAAGGGCGACCTCTTTGTCGCGACTCTCAAAAGCAGGGCGCT
GATTCGCGTCAGGTTTGATGGAGATACAAAGATCAGCCGCATTGAACGCTGGTTTTCCACTGATTTTAAAAAGGGAAAGT
ATGGAAGATTGAGGGATGTCGTTACAGGTCCGGACGGGGCGATTTATTTCACCTCAAGCAACAGGGACGGAAGAGGAGAT
CCTCTGCCCGGCGATGACAGGATCTATCGAATTCTCCCGATAAGCAGCAGGCAATAA

Upstream 100 bases:

>100_bases
AAAAGGCCCCGCCGAAAAAGCCCGGGCCAGCCGGGTCGATTTTTCCCTGAAGTAGCATTCCTGCATCAGAACGGCGACGA
TATGATGTCAATCATTTACA

Downstream 100 bases:

>100_bases
GCAGGTCACCGGAATGCTCTGTTCCTGACGGCATAGTGAAAATCTCAGCTCAGTTTCCTGACATTCCCGACAATTCTGAA
CTCCGAAACCGATGAAATAC

Product: glucose/sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MFSSGLNHKMIDSVRRMKMNGKRVLATGHAMRKALCILLILHLSAATASCTQQQTGGKPQAVEDVFLPDGDGIKVEVWVE
NLNVPWSLVFLPDKRALVSERSGKIRLIINGKLESHPYATVDAVRIGEAGLMGLAMHPRFPAEPYIYAMYTEQKKGALRN
RVVRFRDHGRTGSFDRVILDDIPGGRFHDGGRIAFGPDGMLYVTTGENFNADLAQDRSSLAGKILRISPDGEIPADNPFK
DSPVYSYGHRNPQGLAWQPETGRLFESEHGPSGEFAHFGHDEINRIVKGGNYGWPLVIGAPEIQPYIDPLIVWKEATPPG
GIAFYNGTFLPHLKGDLFVATLKSRALIRVRFDGDTKISRIERWFSTDFKKGKYGRLRDVVTGPDGAIYFTSSNRDGRGD
PLPGDDRIYRILPISSRQ

Sequences:

>Translated_418_residues
MFSSGLNHKMIDSVRRMKMNGKRVLATGHAMRKALCILLILHLSAATASCTQQQTGGKPQAVEDVFLPDGDGIKVEVWVE
NLNVPWSLVFLPDKRALVSERSGKIRLIINGKLESHPYATVDAVRIGEAGLMGLAMHPRFPAEPYIYAMYTEQKKGALRN
RVVRFRDHGRTGSFDRVILDDIPGGRFHDGGRIAFGPDGMLYVTTGENFNADLAQDRSSLAGKILRISPDGEIPADNPFK
DSPVYSYGHRNPQGLAWQPETGRLFESEHGPSGEFAHFGHDEINRIVKGGNYGWPLVIGAPEIQPYIDPLIVWKEATPPG
GIAFYNGTFLPHLKGDLFVATLKSRALIRVRFDGDTKISRIERWFSTDFKKGKYGRLRDVVTGPDGAIYFTSSNRDGRGD
PLPGDDRIYRILPISSRQ
>Mature_418_residues
MFSSGLNHKMIDSVRRMKMNGKRVLATGHAMRKALCILLILHLSAATASCTQQQTGGKPQAVEDVFLPDGDGIKVEVWVE
NLNVPWSLVFLPDKRALVSERSGKIRLIINGKLESHPYATVDAVRIGEAGLMGLAMHPRFPAEPYIYAMYTEQKKGALRN
RVVRFRDHGRTGSFDRVILDDIPGGRFHDGGRIAFGPDGMLYVTTGENFNADLAQDRSSLAGKILRISPDGEIPADNPFK
DSPVYSYGHRNPQGLAWQPETGRLFESEHGPSGEFAHFGHDEINRIVKGGNYGWPLVIGAPEIQPYIDPLIVWKEATPPG
GIAFYNGTFLPHLKGDLFVATLKSRALIRVRFDGDTKISRIERWFSTDFKKGKYGRLRDVVTGPDGAIYFTSSNRDGRGD
PLPGDDRIYRILPISSRQ

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=255, Percent_Identity=29.8039215686275, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI187936953, Length=255, Percent_Identity=29.8039215686275, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI124248546, Length=259, Percent_Identity=30.8880308880309, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1787060, Length=351, Percent_Identity=34.7578347578348, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 46427; Mature: 46427

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSGLNHKMIDSVRRMKMNGKRVLATGHAMRKALCILLILHLSAATASCTQQQTGGKPQ
CCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AVEDVFLPDGDGIKVEVWVENLNVPWSLVFLPDKRALVSERSGKIRLIINGKLESHPYAT
CEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCCCCCEE
VDAVRIGEAGLMGLAMHPRFPAEPYIYAMYTEQKKGALRNRVVRFRDHGRTGSFDRVILD
EEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHEEEEECCCCCCCCCEEEEE
DIPGGRFHDGGRIAFGPDGMLYVTTGENFNADLAQDRSSLAGKILRISPDGEIPADNPFK
CCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCC
DSPVYSYGHRNPQGLAWQPETGRLFESEHGPSGEFAHFGHDEINRIVKGGNYGWPLVIGA
CCCCEECCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
PEIQPYIDPLIVWKEATPPGGIAFYNGTFLPHLKGDLFVATLKSRALIRVRFDGDTKISR
CCCCCCCCEEEEEECCCCCCCEEEECCEECCCCCCCEEEEEECCCEEEEEEECCCCHHHH
IERWFSTDFKKGKYGRLRDVVTGPDGAIYFTSSNRDGRGDPLPGDDRIYRILPISSRQ
HHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MFSSGLNHKMIDSVRRMKMNGKRVLATGHAMRKALCILLILHLSAATASCTQQQTGGKPQ
CCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AVEDVFLPDGDGIKVEVWVENLNVPWSLVFLPDKRALVSERSGKIRLIINGKLESHPYAT
CEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCCCCCEE
VDAVRIGEAGLMGLAMHPRFPAEPYIYAMYTEQKKGALRNRVVRFRDHGRTGSFDRVILD
EEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHEEEEECCCCCCCCCEEEEE
DIPGGRFHDGGRIAFGPDGMLYVTTGENFNADLAQDRSSLAGKILRISPDGEIPADNPFK
CCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCC
DSPVYSYGHRNPQGLAWQPETGRLFESEHGPSGEFAHFGHDEINRIVKGGNYGWPLVIGA
CCCCEECCCCCCCCCEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEC
PEIQPYIDPLIVWKEATPPGGIAFYNGTFLPHLKGDLFVATLKSRALIRVRFDGDTKISR
CCCCCCCCEEEEEECCCCCCCEEEECCEECCCCCCCEEEEEECCCEEEEEEECCCCHHHH
IERWFSTDFKKGKYGRLRDVVTGPDGAIYFTSSNRDGRGDPLPGDDRIYRILPISSRQ
HHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]