Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859598

Identifier: 85859598

GI number: 85859598

Start: 1830434

End: 1830739

Strand: Direct

Name: 85859598

Synonym: SYN_02018

Alternate gene names: NA

Gene position: 1830434-1830739 (Clockwise)

Preceding gene: 85859597

Following gene: 85859599

Centisome position: 57.57

GC content: 47.39

Gene sequence:

>306_bases
ATGCTCGTCCAGTTCAGTATCGTTCCTCTGGGTATCGGGGACAGCATCAGCAAAGACGTTGCAGAAATTATCCGTCTTGT
TGATGAAAGCGGTCTGCCCTATCGAACAAACCCCATGGGAACCGTCATGGAAGGAGAATGGGAAGACGTGATGACCCTGA
TCCGTAAGTGTCATGAGGAGGTATTGAGGAATGCATCGAGAGTACTGACTTCCATAACGATTGATGACCGGCCTGGAAAA
CCTGACCGAATCATCGAGAAGATCAAATCTGTTGAGAAAAGGCTCGGTCGGGAAATAAAAAAATGA

Upstream 100 bases:

>100_bases
GGTTCTTCGATCATCAGGGAATTTTAACAGCCCGTGGCCGTCTGCCTCGAATCGAAACACGCTGTAAATCAATTTTATCC
CTGTCGAAAGGAGTCAAATC

Downstream 100 bases:

>100_bases
TGGAGATCGGAACAGCCGCAATCCTCGCTTCCTGTCCCCGAAGATGGAAAACCACTGAATGCTCATTACCAAGCGTGGAA
ATGTTGCAACTGTTTCACAC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK
PDRIIEKIKSVEKRLGREIKK

Sequences:

>Translated_101_residues
MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK
PDRIIEKIKSVEKRLGREIKK
>Mature_101_residues
MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEEVLRNASRVLTSITIDDRPGK
PDRIIEKIKSVEKRLGREIKK

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002767
- InterPro:   IPR016198 [H]

Pfam domain/function: PF01910 DUF77 [H]

EC number: NA

Molecular weight: Translated: 11462; Mature: 11462

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEE
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VLRNASRVLTSITIDDRPGKPDRIIEKIKSVEKRLGREIKK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVQFSIVPLGIGDSISKDVAEIIRLVDESGLPYRTNPMGTVMEGEWEDVMTLIRKCHEE
CEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VLRNASRVLTSITIDDRPGKPDRIIEKIKSVEKRLGREIKK
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]