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The map label for this gene is 85859596

Identifier: 85859596

GI number: 85859596

Start: 1829158

End: 1829922

Strand: Direct

Name: 85859596

Synonym: SYN_02020

Alternate gene names: NA

Gene position: 1829158-1829922 (Clockwise)

Preceding gene: 85859592

Following gene: 85859597

Centisome position: 57.53

GC content: 48.5

Gene sequence:

>765_bases
ATGAACAATATGGATAACCAGCTTATCAGGACATATCGATTATTTTTGAAAGACAGTATACGTAAGGTTATCGATTTTTC
TGAAACGGCTCAGAGCAGAGGCATTGCACCGCCGCCACTTGAAAAACCCTACACGGAAGACGCCAGGCGGATTGATCTGC
CTTCCTGTGATGAACTTCAGGATGTCAGCCGGATGGACATCATATCTGCCATCCGGAAACGGGAAAGCTGCAGGTCTTAT
CGACCTGAACCTTTGTCACTGAAGGAATTATCGTTTCTTTTGTGGGCCACCCAGGGCATTAAAAGGAAACTGGATCCCGG
CCACGCGTTAAGGACCGTTCCATCCGCGGGCTGCCGTCATGCCCTGGAAACCTATCTCTGTATTTTAAATGTTGACGGAA
TTGAACCGGGGATCTACCGTTACCTCCCCATCGAACATCAAATTCTGTTTGAATTTACCGAGGAAAATTTACAACACAGA
ATGGTTCAGGCCGTTCTGGGGCAACCCTATCCCGGAGAAGCGGCCGTCACATTCATCTGGACGACCATCCCGTACAGAAT
GGAATGGCGCTATGGGCTTGCCGCTCATAAGGTTATTGCCATTGAAGCAGGCCATGTCTGCCAGAATCTTTATCTTGCCT
GCGAATCAATAGGCGCCGGAACCTGCGCGATCGCGGCTTATGATCAGGAAGGAATTGACAGAATACTCGGAATCGACGGA
CAGGATGAATTCACGATTTATCTTGCCTCAGTGGGTAAAAAATGA

Upstream 100 bases:

>100_bases
AAAACAGCATCAAAAAATATCAACAATCATACAGTTATGCTGTGGATATTATCCATCGATAAATATATGATGAGTTTGCT
GAAATCTATGAAAATAAGGC

Downstream 100 bases:

>100_bases
TGATTATGTTCTTCAATATCGATAAATCTGCAAGTTAAGGAGTGCCACAATGCCACTGACCAAAAACGAAATGATGACCA
TGCTCTATAATCAGTTGAAT

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNNMDNQLIRTYRLFLKDSIRKVIDFSETAQSRGIAPPPLEKPYTEDARRIDLPSCDELQDVSRMDIISAIRKRESCRSY
RPEPLSLKELSFLLWATQGIKRKLDPGHALRTVPSAGCRHALETYLCILNVDGIEPGIYRYLPIEHQILFEFTEENLQHR
MVQAVLGQPYPGEAAVTFIWTTIPYRMEWRYGLAAHKVIAIEAGHVCQNLYLACESIGAGTCAIAAYDQEGIDRILGIDG
QDEFTIYLASVGKK

Sequences:

>Translated_254_residues
MNNMDNQLIRTYRLFLKDSIRKVIDFSETAQSRGIAPPPLEKPYTEDARRIDLPSCDELQDVSRMDIISAIRKRESCRSY
RPEPLSLKELSFLLWATQGIKRKLDPGHALRTVPSAGCRHALETYLCILNVDGIEPGIYRYLPIEHQILFEFTEENLQHR
MVQAVLGQPYPGEAAVTFIWTTIPYRMEWRYGLAAHKVIAIEAGHVCQNLYLACESIGAGTCAIAAYDQEGIDRILGIDG
QDEFTIYLASVGKK
>Mature_254_residues
MNNMDNQLIRTYRLFLKDSIRKVIDFSETAQSRGIAPPPLEKPYTEDARRIDLPSCDELQDVSRMDIISAIRKRESCRSY
RPEPLSLKELSFLLWATQGIKRKLDPGHALRTVPSAGCRHALETYLCILNVDGIEPGIYRYLPIEHQILFEFTEENLQHR
MVQAVLGQPYPGEAAVTFIWTTIPYRMEWRYGLAAHKVIAIEAGHVCQNLYLACESIGAGTCAIAAYDQEGIDRILGIDG
QDEFTIYLASVGKK

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415
- InterPro:   IPR020051 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 28820; Mature: 28820

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMDNQLIRTYRLFLKDSIRKVIDFSETAQSRGIAPPPLEKPYTEDARRIDLPSCDELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHH
DVSRMDIISAIRKRESCRSYRPEPLSLKELSFLLWATQGIKRKLDPGHALRTVPSAGCRH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHH
ALETYLCILNVDGIEPGIYRYLPIEHQILFEFTEENLQHRMVQAVLGQPYPGEAAVTFIW
HHHHHEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TTIPYRMEWRYGLAAHKVIAIEAGHVCQNLYLACESIGAGTCAIAAYDQEGIDRILGIDG
EECCEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCC
QDEFTIYLASVGKK
CCCEEEEEEECCCC
>Mature Secondary Structure
MNNMDNQLIRTYRLFLKDSIRKVIDFSETAQSRGIAPPPLEKPYTEDARRIDLPSCDELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCHHHH
DVSRMDIISAIRKRESCRSYRPEPLSLKELSFLLWATQGIKRKLDPGHALRTVPSAGCRH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHH
ALETYLCILNVDGIEPGIYRYLPIEHQILFEFTEENLQHRMVQAVLGQPYPGEAAVTFIW
HHHHHEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TTIPYRMEWRYGLAAHKVIAIEAGHVCQNLYLACESIGAGTCAIAAYDQEGIDRILGIDG
EECCEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCC
QDEFTIYLASVGKK
CCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]