Click here to switch to the map view.

The map label for this gene is 85859586

Identifier: 85859586

GI number: 85859586

Start: 1818390

End: 1819052

Strand: Direct

Name: 85859586

Synonym: SYN_03595

Alternate gene names: NA

Gene position: 1818390-1819052 (Clockwise)

Preceding gene: 85859585

Following gene: 85859588

Centisome position: 57.19

GC content: 52.79

Gene sequence:

>663_bases
GTGCATTTTCATGAGTGTGCGCCCATGGCTCAGCTGGATAGAGCGTCGGACTACGAATCCGGATGTCGCAGGTTCGAATC
CTGCTGGGCGCACCAATATATTCAAGGACTTAGCCGAATAAGGTTAAGTCCTTTTTTCTATTTGCTACCCTGTTGCTGCC
CACAAAGAATACTTTTGGTGACCACCACGGAGTTGCCCTCCTGCCGATTTCTTGAAGAAATGGTCTCTGTCCTGATCGTC
GTCCCCTGCGGCACAGTAAGAATTCACATTGCACAGGGCGTTGGTCACTGTGCCATCCGGGAAGCACATGACGTGCCGTT
TACCAGTGCATCCAGGATGATTTCCAAGCTCCATACCGCCCGGGCAACCAACAGCTTCGAGATGCAAATTGCCAAGCTCA
TCGACTGCGATCTGTTGATCATCAATGACTTCGGTCTCAAACCCTTCACCGGCATCCAGGATGAAGACTTCCACGAGGTG
ATCTCAGAATGCTACGAGCGTAGGAGCACAATTGTGACCTCGAATCTTGACGTTCCGGAATGGCCCGATGCCTTTCCCAA
CCGCATCCTTGGCTCCGCCACGATCGACCGCCTCCGGCAAGGCGCTTACAAAATTGTCCTTGCCGGAATGAACTACTGGA
CTGCGGCAGATAAGCCGGGATGA

Upstream 100 bases:

>100_bases
AAGCGATCGCCTGCTAAGCGATTGTACGCCCTATAAGGTGTACCGCGGGTTCGAATCCCGCTCTCTCCGCCAGTTCACTT
CATGTCCCAAATAAATAACG

Downstream 100 bases:

>100_bases
CAAAAAGCATGTTGTCAGAAAGCACGAAAACAATCCTTAAAAGGAGGTGAGATCACCTGATTAAAAGAGGGGTCGAAGAT
CTTTTTTCATCCCTTTTCAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHFHECAPMAQLDRASDYESGCRRFESCWAHQYIQGLSRIRLSPFFYLLPCCCPQRILLVTTTELPSCRFLEEMVSVLIV
VPCGTVRIHIAQGVGHCAIREAHDVPFTSASRMISKLHTARATNSFEMQIAKLIDCDLLIINDFGLKPFTGIQDEDFHEV
ISECYERRSTIVTSNLDVPEWPDAFPNRILGSATIDRLRQGAYKIVLAGMNYWTAADKPG

Sequences:

>Translated_220_residues
MHFHECAPMAQLDRASDYESGCRRFESCWAHQYIQGLSRIRLSPFFYLLPCCCPQRILLVTTTELPSCRFLEEMVSVLIV
VPCGTVRIHIAQGVGHCAIREAHDVPFTSASRMISKLHTARATNSFEMQIAKLIDCDLLIINDFGLKPFTGIQDEDFHEV
ISECYERRSTIVTSNLDVPEWPDAFPNRILGSATIDRLRQGAYKIVLAGMNYWTAADKPG
>Mature_220_residues
MHFHECAPMAQLDRASDYESGCRRFESCWAHQYIQGLSRIRLSPFFYLLPCCCPQRILLVTTTELPSCRFLEEMVSVLIV
VPCGTVRIHIAQGVGHCAIREAHDVPFTSASRMISKLHTARATNSFEMQIAKLIDCDLLIINDFGLKPFTGIQDEDFHEV
ISECYERRSTIVTSNLDVPEWPDAFPNRILGSATIDRLRQGAYKIVLAGMNYWTAADKPG

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 24886; Mature: 24886

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFHECAPMAQLDRASDYESGCRRFESCWAHQYIQGLSRIRLSPFFYLLPCCCPQRILLV
CCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEE
TTTELPSCRFLEEMVSVLIVVPCGTVRIHIAQGVGHCAIREAHDVPFTSASRMISKLHTA
EECCCCCHHHHHHHHHHEEHCCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHH
RATNSFEMQIAKLIDCDLLIINDFGLKPFTGIQDEDFHEVISECYERRSTIVTSNLDVPE
HCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCC
WPDAFPNRILGSATIDRLRQGAYKIVLAGMNYWTAADKPG
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MHFHECAPMAQLDRASDYESGCRRFESCWAHQYIQGLSRIRLSPFFYLLPCCCPQRILLV
CCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEE
TTTELPSCRFLEEMVSVLIVVPCGTVRIHIAQGVGHCAIREAHDVPFTSASRMISKLHTA
EECCCCCHHHHHHHHHHEEHCCCCCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHH
RATNSFEMQIAKLIDCDLLIINDFGLKPFTGIQDEDFHEVISECYERRSTIVTSNLDVPE
HCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCC
WPDAFPNRILGSATIDRLRQGAYKIVLAGMNYWTAADKPG
CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]