Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859559

Identifier: 85859559

GI number: 85859559

Start: 1782180

End: 1784594

Strand: Direct

Name: 85859559

Synonym: SYN_01902

Alternate gene names: NA

Gene position: 1782180-1784594 (Clockwise)

Preceding gene: 85859558

Following gene: 85859560

Centisome position: 56.06

GC content: 56.48

Gene sequence:

>2415_bases
ATGCCTCAACAGAAGGTCCATGATTCAAGAATAAAGAAAATCGCCCTGGTTGGTAACTATATTCCGCGCCAATGCGGTAT
AGCCACTTTCACGTCCGATCTTCTTACGGCATTGGCCACGGAAGATTCGACGGCGGGATACTGGGCGGTCGCGATGAACG
ACGTTCCCGAGGGTTACCCCTATCCGGCTCAGGTTCGTTTCGAAGTCAATCAGCACCTGTCGGCGGATTACCGGCTCGCG
GCGGACTTCATGAACATGAACCGGGTGGAGACAGCCTGCCTTCAGCACGAATTCGGGATTTTCGGCGGAGATAACGGTGC
ACACATTTTGGAGTTGCTAAGCGGTCTGCGGATGCCCCTGGTGACCACCCTGCACACGGTCATCCAGAGCCCGTCTGCTG
GGCAGATGGTCGTCACCAGACGCATCGCCCAATTATCTGACCGGCTGGTCGTAATGAGCCGGAAGGCCGTCGCAATCCTG
CATGAAGTGTACGGCGTTCCTTCGGAAAAAATCGTCGTAATCCCCCACGGCATTCCCGATGTACCCTTTGTGGACCCCAA
CTTCTATAAGGATCAGTTCGGGGTCGAGGGCCGCAAAGTGATCCTGACCTTCGGGCTGCTTTCCCCCGGCAAAGGTATTG
AGACCGTCATAGAAGCCCTACCACAAGTGGTCAGGGAAAATCCGGAAGCGGTCTACATTGTCCTCGGAGCCACGCACCCG
CATATCAGGAAGGATCAGGGTGAGTCTTACCGCCTTTCTTTGCAGAGCCGCGCCAGGGAACTGGGAGTCGGCGGGCATAT
CATTTTTCACAACCGGTTTGTTGATCTGGAAGAGCTATGTGAATTCATCGGAGCGGCGGATATTTATGTCACACCCTACC
TCAACCGGGAACAGATCGTCTCGGGCACGCTCGCCTATGCCCTGGGAAGCGGGAAGGCGACGATCTCCACCCCTTACTGG
TACGCCGAGGAAATGCTGGCCGACGGGCGCGGCCGGATCGTTCCTTTCCGCGACACTGAGGCCATGGCCAGGGAGATCAA
CAGTCTTCTCGCTAGGGAGGTGGAACGGCATACCATGCGCAAGCGCGCTTACACTTTCTGCCGGGATATGACCTGGAAAG
AGGTGGCGCGGAGGTACTTGGAAGTTTTCAAGGAGGTGAAGGAAGAAAGAGAAAAGAAGCCCAAAACAATATTCCGGACC
AGGACGTTGAATTCCTCCCCCCGGGATGTGCCCCAGCCCAAATTGGACCATATTGCCCGGCTGACCGATGACGTCGGGAT
CATGCAGCATGCCAAGTTCATCATTCCCGATCGCCGCCACGGCTATTGCACCGATGATAACGCGAGGGCGCTGATGGCGG
TTCTCATGGCCCGGGAAATGGTTCCCGACAGCGCACGCGTGATGGAACTGGCCTGCACTTACCTGAGCTTTTTGCATCAT
GCGTTTGACGAGCACACGAGCCGCTTCCGAAACTTCATGGACTACGAACGCAGGTGGAAGGATGAAACCGGCTCCCAGGA
CAGTCACGGCCGAGCGCTCTGGAGTTTAGGAGAGGTCATAGAGCTGGTCGAGTCAAATGATATCCGCGGAGCGGCCCTGG
AACTATTCGAAAAAGCCCTGCCGGCGGTACTGGAATTCGATGCGCCCCGTTCATGGGCATTCGCGCTTGGGGGAATACAC
GCCTATTTGCAGAAATTCAGCGGTGACAGCGAGGCGAGGCGCATTCAGGAGAAGCTGGCAGTTCAACTCTACGAGTGCTG
GCGGAAATGCGCCTCGGATGACTGGCCATGGATCGAGGAGAACCTTACTTATGACAACGGCAGCATATGCCGGGCGTTGA
TCACGTCAGGAAACTGGATGCAGAGGGAGGATATTTTGGAAGCCGGCCTGATTTCACTCGCGTGGCTGATGAGAATTCAA
ACCGGCTCCGGCGGACATTTCGCGCCCGTAGGGAACAAGGGCTGGTTTCCGCGCGGAGGCGTGATGGCTCGTTTCGACCA
GCAGCCGATCGAAGCATTAAGCATGATAAAAGCGTGCCGTGCCGCTTATGACCAGACCCGCGACGCGAAATGGCTCATGC
ATGCCCGGCGTTGTCTGGAGTGGTTCCTCGGGCGAAACGATCTTGGCGTTCATCTATACGACCAAGTGACGGGTGGCTGC
TGCGACGGCCTGCAGGCCAACGGTCCGAACCTGAACCAGGGCGCGGAATCGACCCTATCCTGTTTTCTGTCTCTAATCAA
TCTGCACCAAATCAATGCCCAAGTCTCCCTGGAGGGATCAAGTGAAGGCAGGAAGGATATCCATCAAGAGCCTGTAGTCC
CCTCCCCGCTGGCTCTTTCCAGAGAAATCAAAAACCGGACCGTGATAGACGAAGGCACCGACATTTCTTCAGGGAGGATC
ACCGCAGGCACATGA

Upstream 100 bases:

>100_bases
ATAATCGGACAGCATAAAGCGTCACCCATGAACACGGAAGGTTGCAAGGTCTGGGCCACAGCGCAAGGATCTATTTTGAG
ACATAAAGAGGAGAACAGCC

Downstream 100 bases:

>100_bases
AGTTCGAGCGATCCAGGGAATTGTTCACCCGGTTTGAGAAAAACCCAATCATCCAGTCAAGAGATATCCCTTACCAGGCG
AATTCGGTTTTTAATGCCGC

Product: mannosyltransferase

Products: NA

Alternate protein names: Mannosyltransferase; Glycosyltransferase Group I; Group 1 Glycosyl Transferase; Glycosyl Transferase; Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; Lipopolysaccharide Transferase Family Protein; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLA
ADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAIL
HEVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP
HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYW
YAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRT
RTLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH
AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIH
AYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQ
TGSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC
CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRI
TAGT

Sequences:

>Translated_804_residues
MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLA
ADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAIL
HEVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP
HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYW
YAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRT
RTLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH
AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIH
AYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQ
TGSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC
CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRI
TAGT
>Mature_803_residues
PQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLAA
DFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILH
EVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHPH
IRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYWY
AEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTR
TLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHHA
FDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIHA
YLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQT
GSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGCC
DGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRIT
AGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90499; Mature: 90368

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYP
CCCCHHHHHHHHEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
YPAQVRFEVNQHLSADYRLAADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPL
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH
VTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILHEVYGVPSEKIVVIPHGIPD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP
CCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC
HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIV
CCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHH
SGTLAYALGSGKATISTPYWYAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMR
HHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
KRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTRTLNSSPRDVPQPKLDHIAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHH
LTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH
HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PAVLEFDAPRSWAFALGGIHAYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEE
HHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQTGSGGHFAPVGNKGWFPRGG
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC
VMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC
CEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC
CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHH
REIKNRTVIDEGTDISSGRITAGT
HHHHCCEECCCCCCCCCCCEECCC
>Mature Secondary Structure 
PQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYP
CCCHHHHHHHHEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
YPAQVRFEVNQHLSADYRLAADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPL
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH
VTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILHEVYGVPSEKIVVIPHGIPD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP
CCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC
HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIV
CCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHH
SGTLAYALGSGKATISTPYWYAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMR
HHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH
KRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTRTLNSSPRDVPQPKLDHIAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHH
LTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH
HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PAVLEFDAPRSWAFALGGIHAYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEE
HHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQTGSGGHFAPVGNKGWFPRGG
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC
VMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC
CEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC
CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHH
REIKNRTVIDEGTDISSGRITAGT
HHHHCCEECCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA