| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859559
Identifier: 85859559
GI number: 85859559
Start: 1782180
End: 1784594
Strand: Direct
Name: 85859559
Synonym: SYN_01902
Alternate gene names: NA
Gene position: 1782180-1784594 (Clockwise)
Preceding gene: 85859558
Following gene: 85859560
Centisome position: 56.06
GC content: 56.48
Gene sequence:
>2415_bases ATGCCTCAACAGAAGGTCCATGATTCAAGAATAAAGAAAATCGCCCTGGTTGGTAACTATATTCCGCGCCAATGCGGTAT AGCCACTTTCACGTCCGATCTTCTTACGGCATTGGCCACGGAAGATTCGACGGCGGGATACTGGGCGGTCGCGATGAACG ACGTTCCCGAGGGTTACCCCTATCCGGCTCAGGTTCGTTTCGAAGTCAATCAGCACCTGTCGGCGGATTACCGGCTCGCG GCGGACTTCATGAACATGAACCGGGTGGAGACAGCCTGCCTTCAGCACGAATTCGGGATTTTCGGCGGAGATAACGGTGC ACACATTTTGGAGTTGCTAAGCGGTCTGCGGATGCCCCTGGTGACCACCCTGCACACGGTCATCCAGAGCCCGTCTGCTG GGCAGATGGTCGTCACCAGACGCATCGCCCAATTATCTGACCGGCTGGTCGTAATGAGCCGGAAGGCCGTCGCAATCCTG CATGAAGTGTACGGCGTTCCTTCGGAAAAAATCGTCGTAATCCCCCACGGCATTCCCGATGTACCCTTTGTGGACCCCAA CTTCTATAAGGATCAGTTCGGGGTCGAGGGCCGCAAAGTGATCCTGACCTTCGGGCTGCTTTCCCCCGGCAAAGGTATTG AGACCGTCATAGAAGCCCTACCACAAGTGGTCAGGGAAAATCCGGAAGCGGTCTACATTGTCCTCGGAGCCACGCACCCG CATATCAGGAAGGATCAGGGTGAGTCTTACCGCCTTTCTTTGCAGAGCCGCGCCAGGGAACTGGGAGTCGGCGGGCATAT CATTTTTCACAACCGGTTTGTTGATCTGGAAGAGCTATGTGAATTCATCGGAGCGGCGGATATTTATGTCACACCCTACC TCAACCGGGAACAGATCGTCTCGGGCACGCTCGCCTATGCCCTGGGAAGCGGGAAGGCGACGATCTCCACCCCTTACTGG TACGCCGAGGAAATGCTGGCCGACGGGCGCGGCCGGATCGTTCCTTTCCGCGACACTGAGGCCATGGCCAGGGAGATCAA CAGTCTTCTCGCTAGGGAGGTGGAACGGCATACCATGCGCAAGCGCGCTTACACTTTCTGCCGGGATATGACCTGGAAAG AGGTGGCGCGGAGGTACTTGGAAGTTTTCAAGGAGGTGAAGGAAGAAAGAGAAAAGAAGCCCAAAACAATATTCCGGACC AGGACGTTGAATTCCTCCCCCCGGGATGTGCCCCAGCCCAAATTGGACCATATTGCCCGGCTGACCGATGACGTCGGGAT CATGCAGCATGCCAAGTTCATCATTCCCGATCGCCGCCACGGCTATTGCACCGATGATAACGCGAGGGCGCTGATGGCGG TTCTCATGGCCCGGGAAATGGTTCCCGACAGCGCACGCGTGATGGAACTGGCCTGCACTTACCTGAGCTTTTTGCATCAT GCGTTTGACGAGCACACGAGCCGCTTCCGAAACTTCATGGACTACGAACGCAGGTGGAAGGATGAAACCGGCTCCCAGGA CAGTCACGGCCGAGCGCTCTGGAGTTTAGGAGAGGTCATAGAGCTGGTCGAGTCAAATGATATCCGCGGAGCGGCCCTGG AACTATTCGAAAAAGCCCTGCCGGCGGTACTGGAATTCGATGCGCCCCGTTCATGGGCATTCGCGCTTGGGGGAATACAC GCCTATTTGCAGAAATTCAGCGGTGACAGCGAGGCGAGGCGCATTCAGGAGAAGCTGGCAGTTCAACTCTACGAGTGCTG GCGGAAATGCGCCTCGGATGACTGGCCATGGATCGAGGAGAACCTTACTTATGACAACGGCAGCATATGCCGGGCGTTGA TCACGTCAGGAAACTGGATGCAGAGGGAGGATATTTTGGAAGCCGGCCTGATTTCACTCGCGTGGCTGATGAGAATTCAA ACCGGCTCCGGCGGACATTTCGCGCCCGTAGGGAACAAGGGCTGGTTTCCGCGCGGAGGCGTGATGGCTCGTTTCGACCA GCAGCCGATCGAAGCATTAAGCATGATAAAAGCGTGCCGTGCCGCTTATGACCAGACCCGCGACGCGAAATGGCTCATGC ATGCCCGGCGTTGTCTGGAGTGGTTCCTCGGGCGAAACGATCTTGGCGTTCATCTATACGACCAAGTGACGGGTGGCTGC TGCGACGGCCTGCAGGCCAACGGTCCGAACCTGAACCAGGGCGCGGAATCGACCCTATCCTGTTTTCTGTCTCTAATCAA TCTGCACCAAATCAATGCCCAAGTCTCCCTGGAGGGATCAAGTGAAGGCAGGAAGGATATCCATCAAGAGCCTGTAGTCC CCTCCCCGCTGGCTCTTTCCAGAGAAATCAAAAACCGGACCGTGATAGACGAAGGCACCGACATTTCTTCAGGGAGGATC ACCGCAGGCACATGA
Upstream 100 bases:
>100_bases ATAATCGGACAGCATAAAGCGTCACCCATGAACACGGAAGGTTGCAAGGTCTGGGCCACAGCGCAAGGATCTATTTTGAG ACATAAAGAGGAGAACAGCC
Downstream 100 bases:
>100_bases AGTTCGAGCGATCCAGGGAATTGTTCACCCGGTTTGAGAAAAACCCAATCATCCAGTCAAGAGATATCCCTTACCAGGCG AATTCGGTTTTTAATGCCGC
Product: mannosyltransferase
Products: NA
Alternate protein names: Mannosyltransferase; Glycosyltransferase Group I; Group 1 Glycosyl Transferase; Glycosyl Transferase; Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; Lipopolysaccharide Transferase Family Protein; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLA ADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAIL HEVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYW YAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRT RTLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIH AYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQ TGSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRI TAGT
Sequences:
>Translated_804_residues MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLA ADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAIL HEVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYW YAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRT RTLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIH AYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQ TGSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRI TAGT >Mature_803_residues PQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYPYPAQVRFEVNQHLSADYRLAA DFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPLVTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILH EVYGVPSEKIVVIPHGIPDVPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHPH IRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIVSGTLAYALGSGKATISTPYWY AEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMRKRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTR TLNSSPRDVPQPKLDHIARLTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHHA FDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKALPAVLEFDAPRSWAFALGGIHA YLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEENLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQT GSGGHFAPVGNKGWFPRGGVMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGCC DGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALSREIKNRTVIDEGTDISSGRIT AGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90499; Mature: 90368
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYP CCCCHHHHHHHHEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC YPAQVRFEVNQHLSADYRLAADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPL CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH VTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILHEVYGVPSEKIVVIPHGIPD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC VPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP CCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIV CCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHH SGTLAYALGSGKATISTPYWYAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMR HHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH KRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTRTLNSSPRDVPQPKLDHIAR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHH LTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PAVLEFDAPRSWAFALGGIHAYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEE HHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQTGSGGHFAPVGNKGWFPRGG CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC VMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC CEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHH REIKNRTVIDEGTDISSGRITAGT HHHHCCEECCCCCCCCCCCEECCC >Mature Secondary Structure PQQKVHDSRIKKIALVGNYIPRQCGIATFTSDLLTALATEDSTAGYWAVAMNDVPEGYP CCCHHHHHHHHEEHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC YPAQVRFEVNQHLSADYRLAADFMNMNRVETACLQHEFGIFGGDNGAHILELLSGLRMPL CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH VTTLHTVIQSPSAGQMVVTRRIAQLSDRLVVMSRKAVAILHEVYGVPSEKIVVIPHGIPD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC VPFVDPNFYKDQFGVEGRKVILTFGLLSPGKGIETVIEALPQVVRENPEAVYIVLGATHP CCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC HIRKDQGESYRLSLQSRARELGVGGHIIFHNRFVDLEELCEFIGAADIYVTPYLNREQIV CCCCCCCCCEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHH SGTLAYALGSGKATISTPYWYAEEMLADGRGRIVPFRDTEAMAREINSLLAREVERHTMR HHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH KRAYTFCRDMTWKEVARRYLEVFKEVKEEREKKPKTIFRTRTLNSSPRDVPQPKLDHIAR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHH LTDDVGIMQHAKFIIPDRRHGYCTDDNARALMAVLMAREMVPDSARVMELACTYLSFLHH HHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AFDEHTSRFRNFMDYERRWKDETGSQDSHGRALWSLGEVIELVESNDIRGAALELFEKAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PAVLEFDAPRSWAFALGGIHAYLQKFSGDSEARRIQEKLAVQLYECWRKCASDDWPWIEE HHHEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NLTYDNGSICRALITSGNWMQREDILEAGLISLAWLMRIQTGSGGHFAPVGNKGWFPRGG CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC VMARFDQQPIEALSMIKACRAAYDQTRDAKWLMHARRCLEWFLGRNDLGVHLYDQVTGGC CEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCC CDGLQANGPNLNQGAESTLSCFLSLINLHQINAQVSLEGSSEGRKDIHQEPVVPSPLALS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCCCHHHH REIKNRTVIDEGTDISSGRITAGT HHHHCCEECCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA