| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859528
Identifier: 85859528
GI number: 85859528
Start: 1754437
End: 1755396
Strand: Direct
Name: 85859528
Synonym: SYN_01870
Alternate gene names: NA
Gene position: 1754437-1755396 (Clockwise)
Preceding gene: 85859527
Following gene: 85859529
Centisome position: 55.18
GC content: 55.62
Gene sequence:
>960_bases GTGCCATCCCTTCGGGAGGACGGGGCTCATCTGGGGAGCGCTCAAGAACCCGCCGCTCGTAGGGGACAACTTCGTCTGGC AGCTCTTCAGGAGAAGGTCATGCTGCGCTTTCTGATCAAGAAAGGAACCCGGATGGGACTACTGATCCTTTTCGCGTTTA TGGGTTTCTTACATGCGTCCATTCCCGACTCTGGAGCGGATGACATGGAGGACATCAGCCGATTCATGGAGAACGCAGGC CGGATCGGCCGGAACATCGAGATCCCGGAGAATCTCCACAAGGCTCAGGGGCAGAAAGAAGCGGGAAAGCTGCTGGAATA CTACCAGTCGGAGGCGTTCAAGAGGAAATACGAGGCGGAGATCGAGCGTCTCAAGGGAACGGTTTTCAAGGATACGATCG ATTCCTATTACGGAGATTCCAACGGAGCGGAAAAAGACAGCGTCAAAGGGGGAACCCTCCCCGGAAACGAACGGATCTAT CTTTTCATATCCTCATCCGTTCCCATCGGCACGCTAAGGAACTATGCGAGGGACCTGGATAGGCTTGGCGACCCGAACGT CTTCATGGTGCTGCAGGGCTTCGTGGGCGGGATGAAGCGCGTGAAGCCCACGATGGATTTCGTGCGTAAGATCATCACCG AAGATGCGGACTGTGACATTCAAAAGAACAAATGCAGCGCTTACAAGGTCAAAGTCAAGATTGACCCCCTCCTCTTCCGA AAATACGGGATCACCCGGGTGCCTGCCGCCGTTTACGTGCCGGACGTCCGGATCATGGATGTGACGTTGAGCGAGGGAAT GGAAGGGAACGCGAAGACGGGCGATCATTATGTTCTCCACGGAGACGCTTCACTGGCATACATGCTGGAGACCCTGCGCA GGCCATCCGGGAGGCGCTCGATCGACCTCCTGATCGAGGCACTGAAAGGCGGAATTTACCACGAGGTGAACAAGAGATGA
Upstream 100 bases:
>100_bases TCTGCGACACGGCCCTCAACCTGTGCGCCTGCGTCCCCACGCCCATCTGGGTGAAGCACAACTGGCGCATGCACGTCGCC AAGCCGGTGCGCGACTTCAT
Downstream 100 bases:
>100_bases AGGAAAGCATTGAGAAAGAAGAAATGATGGAGTCCAGCGCCGCTCAACCGGGAGAAATCCCCGCGGGTGCAGGGAAAACG AAACAGGAAGGCAAGGTGGG
Product: cytoplasmic protein
Products: NA
Alternate protein names: Cytoplasmic Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPSLREDGAHLGSAQEPAARRGQLRLAALQEKVMLRFLIKKGTRMGLLILFAFMGFLHASIPDSGADDMEDISRFMENAG RIGRNIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAEIERLKGTVFKDTIDSYYGDSNGAEKDSVKGGTLPGNERIY LFISSSVPIGTLRNYARDLDRLGDPNVFMVLQGFVGGMKRVKPTMDFVRKIITEDADCDIQKNKCSAYKVKVKIDPLLFR KYGITRVPAAVYVPDVRIMDVTLSEGMEGNAKTGDHYVLHGDASLAYMLETLRRPSGRRSIDLLIEALKGGIYHEVNKR
Sequences:
>Translated_319_residues MPSLREDGAHLGSAQEPAARRGQLRLAALQEKVMLRFLIKKGTRMGLLILFAFMGFLHASIPDSGADDMEDISRFMENAG RIGRNIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAEIERLKGTVFKDTIDSYYGDSNGAEKDSVKGGTLPGNERIY LFISSSVPIGTLRNYARDLDRLGDPNVFMVLQGFVGGMKRVKPTMDFVRKIITEDADCDIQKNKCSAYKVKVKIDPLLFR KYGITRVPAAVYVPDVRIMDVTLSEGMEGNAKTGDHYVLHGDASLAYMLETLRRPSGRRSIDLLIEALKGGIYHEVNKR >Mature_318_residues PSLREDGAHLGSAQEPAARRGQLRLAALQEKVMLRFLIKKGTRMGLLILFAFMGFLHASIPDSGADDMEDISRFMENAGR IGRNIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAEIERLKGTVFKDTIDSYYGDSNGAEKDSVKGGTLPGNERIYL FISSSVPIGTLRNYARDLDRLGDPNVFMVLQGFVGGMKRVKPTMDFVRKIITEDADCDIQKNKCSAYKVKVKIDPLLFRK YGITRVPAAVYVPDVRIMDVTLSEGMEGNAKTGDHYVLHGDASLAYMLETLRRPSGRRSIDLLIEALKGGIYHEVNKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35744; Mature: 35613
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLREDGAHLGSAQEPAARRGQLRLAALQEKVMLRFLIKKGTRMGLLILFAFMGFLHAS CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC IPDSGADDMEDISRFMENAGRIGRNIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IERLKGTVFKDTIDSYYGDSNGAEKDSVKGGTLPGNERIYLFISSSVPIGTLRNYARDLD HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH RLGDPNVFMVLQGFVGGMKRVKPTMDFVRKIITEDADCDIQKNKCSAYKVKVKIDPLLFR HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECHHHHH KYGITRVPAAVYVPDVRIMDVTLSEGMEGNAKTGDHYVLHGDASLAYMLETLRRPSGRRS HCCCCCCCCEEECCCEEEEEEEHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHH IDLLIEALKGGIYHEVNKR HHHHHHHHHCCHHHHCCCC >Mature Secondary Structure PSLREDGAHLGSAQEPAARRGQLRLAALQEKVMLRFLIKKGTRMGLLILFAFMGFLHAS CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC IPDSGADDMEDISRFMENAGRIGRNIEIPENLHKAQGQKEAGKLLEYYQSEAFKRKYEAE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IERLKGTVFKDTIDSYYGDSNGAEKDSVKGGTLPGNERIYLFISSSVPIGTLRNYARDLD HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH RLGDPNVFMVLQGFVGGMKRVKPTMDFVRKIITEDADCDIQKNKCSAYKVKVKIDPLLFR HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECHHHHH KYGITRVPAAVYVPDVRIMDVTLSEGMEGNAKTGDHYVLHGDASLAYMLETLRRPSGRRS HCCCCCCCCEEECCCEEEEEEEHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCHH IDLLIEALKGGIYHEVNKR HHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA