Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859517

Identifier: 85859517

GI number: 85859517

Start: 1740413

End: 1740730

Strand: Direct

Name: 85859517

Synonym: SYN_01859

Alternate gene names: NA

Gene position: 1740413-1740730 (Clockwise)

Preceding gene: 85859516

Following gene: 85859518

Centisome position: 54.74

GC content: 59.75

Gene sequence:

>318_bases
ATGAAGAAACATCCGGGTTCCAAGGAAATGCTGTTGGCAGTCATCGCCGCGCAGGGTCTTCTTATCCTTTTCCATTACGG
GGAGGCGCTCGCCATGACGGCGCCTTCCACGGGGTCCTTCGCCTACGACATCTACGACATCGGAGTCAACTCCATCCTCA
AGGGTCCCATCGGCTTCATCGGCGGGGTCGGCGCTATCGTCTTCGGAGCGATCGAGGCCATACGGGGACGGATACTGGAA
GCTGTCCCCGCCATCCTGGGCGGGGCCGCGCTTCTGAAGGCGGATTCCATTGTCCAGACCCTGGGTTGCATCATTTAG

Upstream 100 bases:

>100_bases
GCGGGCGTCTTCGCCACCCCGACCCTGTGGGTCAACGGGAAACACGTACCCGGGGCAGACATACCGCTTATCGAAAAATA
CCTGAAAGGAGAAAAATGAC

Downstream 100 bases:

>100_bases
CCGGTCTGAAGCGATGACGAAGCGCTTTCCGCAGTATCTCTCGGCCCCGCTGCAGGTGCTCTGGTTCGAGCCGGACGAGT
TGGGGGTCGTCTTCACCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKKHPGSKEMLLAVIAAQGLLILFHYGEALAMTAPSTGSFAYDIYDIGVNSILKGPIGFIGGVGAIVFGAIEAIRGRILE
AVPAILGGAALLKADSIVQTLGCII

Sequences:

>Translated_105_residues
MKKHPGSKEMLLAVIAAQGLLILFHYGEALAMTAPSTGSFAYDIYDIGVNSILKGPIGFIGGVGAIVFGAIEAIRGRILE
AVPAILGGAALLKADSIVQTLGCII
>Mature_105_residues
MKKHPGSKEMLLAVIAAQGLLILFHYGEALAMTAPSTGSFAYDIYDIGVNSILKGPIGFIGGVGAIVFGAIEAIRGRILE
AVPAILGGAALLKADSIVQTLGCII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10752; Mature: 10752

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHPGSKEMLLAVIAAQGLLILFHYGEALAMTAPSTGSFAYDIYDIGVNSILKGPIGFI
CCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEEHHHHHCHHHHHHCCHHHH
GGVGAIVFGAIEAIRGRILEAVPAILGGAALLKADSIVQTLGCII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKHPGSKEMLLAVIAAQGLLILFHYGEALAMTAPSTGSFAYDIYDIGVNSILKGPIGFI
CCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEEHHHHHCHHHHHHCCHHHH
GGVGAIVFGAIEAIRGRILEAVPAILGGAALLKADSIVQTLGCII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA