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The map label for this gene is yafK [C]

Identifier: 85859401

GI number: 85859401

Start: 1607235

End: 1608179

Strand: Direct

Name: yafK [C]

Synonym: SYN_02183

Alternate gene names: 85859401

Gene position: 1607235-1608179 (Clockwise)

Preceding gene: 85859400

Following gene: 85859402

Centisome position: 50.55

GC content: 45.4

Gene sequence:

>945_bases
ATGGATAAAAAGCGAAACAGAACAGGCGCGCTTCGCTCTTTTTTATTTGCCTGCGTCATCACAGCACCGATTCTGATATG
CGCCTGCAGTCACTATATGGCCAGGCCATCCTTCGGGGAAGCAAATGAATATTTCAGTCAGGGAAACTATATAGCCTCTC
TGAGTAAATATGAGCAGATAATGAAGAAATATCCGGCGGCAGGAGACAGGGTTCTTTTTGAGATGGGTATTATTTACGCA
TACCCTGGAAATGAGCAGAAAGATTATCAGAAATCACTGGAATGTTTCCAGAAGCTCCTGAAGGATTACCCGGAGAGCCG
GTACAGACAGGACAGCGTGGAGATGATCGCTCATGTCGATAATGTCGCGATAAAAGATAAAAGGATTATCGCTCTGCAAA
AACAGATTACGACTCTCGAACAGGAGCTTAAGAGCAGGGATAATGAGGTTGCTGCATTGAGAAAAAATATTGAAGCTCTT
GAACGTGAACTCAAAAACAGGATTTCTGCAATCCCGAATATGCCGGCGGACCGGATACTGATTGAAAAGAGAAAACGAAG
ATTGACATTGATCGCAAGGGACAAGGTGCTCAAGATGTACAAGATAGCCCTGGGAGGTAACCCGGACGGTCCGAAAATAA
GACAGGGCGATAACAAAACCCCCGAGGGGACCTACATAATCGATTCAAGGAACAGGGATAGCCGATATCACCTCGCCCTT
CACATTTCCTATCCAAATGACGAAGACAGAAAACGGGCAAGGCGTTTGGGTGTCTCGCCAGGTGGCAATATCATGATCCA
CGGTCTGAGGAACGGTTTTTCGTGGATTGGAGATTTTCACACAGCAAATGACTGGACTAAAGGGTGCATTGCCGTTACGA
ATGAAGAGATAGAGGAAATTGCCCGTTTAGTGCGAAATGGTACAATTGTTCACATTTTGCCATAA

Upstream 100 bases:

>100_bases
TCTAATTTGTAATGAAGTAGCTATTTTTGAGGTAAATAAGTAATAGGAACCGGACAGGTTCTGCGTTCATCAAAAATATA
CACGACTGCCGAGGAGTATA

Downstream 100 bases:

>100_bases
AATGCCTCAATACCATATCACAATAATTGGATCTTATTTGGCCCATGAACCGTAATTTTAAACCTGAAAACATATTCAAA
AGACTTCGTCTTGTAACAGT

Product: protein ERFK

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MDKKRNRTGALRSFLFACVITAPILICACSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYPAAGDRVLFEMGIIYA
YPGNEQKDYQKSLECFQKLLKDYPESRYRQDSVEMIAHVDNVAIKDKRIIALQKQITTLEQELKSRDNEVAALRKNIEAL
ERELKNRISAIPNMPADRILIEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIIDSRNRDSRYHLAL
HISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEIARLVRNGTIVHILP

Sequences:

>Translated_314_residues
MDKKRNRTGALRSFLFACVITAPILICACSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYPAAGDRVLFEMGIIYA
YPGNEQKDYQKSLECFQKLLKDYPESRYRQDSVEMIAHVDNVAIKDKRIIALQKQITTLEQELKSRDNEVAALRKNIEAL
ERELKNRISAIPNMPADRILIEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIIDSRNRDSRYHLAL
HISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEIARLVRNGTIVHILP
>Mature_314_residues
MDKKRNRTGALRSFLFACVITAPILICACSHYMARPSFGEANEYFSQGNYIASLSKYEQIMKKYPAAGDRVLFEMGIIYA
YPGNEQKDYQKSLECFQKLLKDYPESRYRQDSVEMIAHVDNVAIKDKRIIALQKQITTLEQELKSRDNEVAALRKNIEAL
ERELKNRISAIPNMPADRILIEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIIDSRNRDSRYHLAL
HISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEIARLVRNGTIVHILP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36002; Mature: 36002

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKRNRTGALRSFLFACVITAPILICACSHYMARPSFGEANEYFSQGNYIASLSKYEQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHH
MKKYPAAGDRVLFEMGIIYAYPGNEQKDYQKSLECFQKLLKDYPESRYRQDSVEMIAHVD
HHHCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NVAIKDKRIIALQKQITTLEQELKSRDNEVAALRKNIEALERELKNRISAIPNMPADRIL
CCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIIDSRNRDSRYHLAL
HHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
HISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEI
EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCEEEECHHHHHHH
ARLVRNGTIVHILP
HHHHHCCCEEEEEC
>Mature Secondary Structure
MDKKRNRTGALRSFLFACVITAPILICACSHYMARPSFGEANEYFSQGNYIASLSKYEQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHH
MKKYPAAGDRVLFEMGIIYAYPGNEQKDYQKSLECFQKLLKDYPESRYRQDSVEMIAHVD
HHHCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NVAIKDKRIIALQKQITTLEQELKSRDNEVAALRKNIEALERELKNRISAIPNMPADRIL
CCEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IEKRKRRLTLIARDKVLKMYKIALGGNPDGPKIRQGDNKTPEGTYIIDSRNRDSRYHLAL
HHHHHHHEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
HISYPNDEDRKRARRLGVSPGGNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEI
EEECCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCEEEECHHHHHHH
ARLVRNGTIVHILP
HHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA