| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85859149
Identifier: 85859149
GI number: 85859149
Start: 1325205
End: 1325711
Strand: Direct
Name: 85859149
Synonym: SYN_02865
Alternate gene names: NA
Gene position: 1325205-1325711 (Clockwise)
Preceding gene: 85859148
Following gene: 85859150
Centisome position: 41.68
GC content: 53.65
Gene sequence:
>507_bases TTGAAACAGGCCGGAAAAAACAAGGAGAAATCGGAGGACAGGAAAAGAATGGATGCCTTTCTCAATGAACCGATGGCCTT CCGGGGGATTCTCTGGGGGCAGCGCCGGGATAGCCTGACCGGCCGGACCTTTCTGCCTGTCCGTGAGGACGGGGACATCA CGTCTTTCCGCCTGGAGGGAGACCTGCTGGAGATCGACGACACGAAGGTTTCCGACATCGTTTACTCCTTTTACCGGAAC CGGTTTTACCGCGTCAGCGTCATCGTCGATTCCCGTGAAGATTTCAAGAAAATCAGAAGACACTTTTTTGACACCCACGG CGAAGGCGTCTCCGTAAGCAACGAAGAGGAGGAGACGGAAAGCTGTTACTGGGCGGGCGCCGAACTGGATATCTGCCTCA GATACAGCGAAAAATCAGGCGGCCGCATCGAATACTCCTTCCGCCCCATTCACAAACGGGAAGAAAAAGAAGCCAAGCTG AAAGCCATCCACGACTGGGAAAAATAA
Upstream 100 bases:
>100_bases GGATCGACCGGATACGCAGCGGGGCATATGCCGCATGGATCGATGAACAATACGGGGATTCATCCGTCAGTCAGACAGCA GCCGTGGAAAAATAGAGCGG
Downstream 100 bases:
>100_bases GTCCGGTTTACTGCTGCAGCCAGTTCTTGATGCGGGGGGCTTCGGTGGAAAGCCAGCGGGGAGAAAGGCGCAGATCGAGA AACAGGCGGAAGAGTGAAAT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKQAGKNKEKSEDRKRMDAFLNEPMAFRGILWGQRRDSLTGRTFLPVREDGDITSFRLEGDLLEIDDTKVSDIVYSFYRN RFYRVSVIVDSREDFKKIRRHFFDTHGEGVSVSNEEEETESCYWAGAELDICLRYSEKSGGRIEYSFRPIHKREEKEAKL KAIHDWEK
Sequences:
>Translated_168_residues MKQAGKNKEKSEDRKRMDAFLNEPMAFRGILWGQRRDSLTGRTFLPVREDGDITSFRLEGDLLEIDDTKVSDIVYSFYRN RFYRVSVIVDSREDFKKIRRHFFDTHGEGVSVSNEEEETESCYWAGAELDICLRYSEKSGGRIEYSFRPIHKREEKEAKL KAIHDWEK >Mature_168_residues MKQAGKNKEKSEDRKRMDAFLNEPMAFRGILWGQRRDSLTGRTFLPVREDGDITSFRLEGDLLEIDDTKVSDIVYSFYRN RFYRVSVIVDSREDFKKIRRHFFDTHGEGVSVSNEEEETESCYWAGAELDICLRYSEKSGGRIEYSFRPIHKREEKEAKL KAIHDWEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19899; Mature: 19899
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAGKNKEKSEDRKRMDAFLNEPMAFRGILWGQRRDSLTGRTFLPVREDGDITSFRLEG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECC DLLEIDDTKVSDIVYSFYRNRFYRVSVIVDSREDFKKIRRHFFDTHGEGVSVSNEEEETE CEEEECCCHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHH SCYWAGAELDICLRYSEKSGGRIEYSFRPIHKREEKEAKLKAIHDWEK HEEECCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKQAGKNKEKSEDRKRMDAFLNEPMAFRGILWGQRRDSLTGRTFLPVREDGDITSFRLEG CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECC DLLEIDDTKVSDIVYSFYRNRFYRVSVIVDSREDFKKIRRHFFDTHGEGVSVSNEEEETE CEEEECCCHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHH SCYWAGAELDICLRYSEKSGGRIEYSFRPIHKREEKEAKLKAIHDWEK HEEECCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA