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The map label for this gene is sufB [C]

Identifier: 85859147

GI number: 85859147

Start: 1323157

End: 1324077

Strand: Direct

Name: sufB [C]

Synonym: SYN_02867

Alternate gene names: 85859147

Gene position: 1323157-1324077 (Clockwise)

Preceding gene: 85859146

Following gene: 85859148

Centisome position: 41.62

GC content: 57.98

Gene sequence:

>921_bases
ATGTTAGATGCTTTAGATAAGGACCTGCTCAAGGCTGTCGCCGACCTGGAAGACATTCCCAAGGGGGCCTACAATATAAG
AAAGAACGGGAAACTGCTGACACGGGCAACCACCGCCAATATCGATATCGAAAGCAACGCCGACGGCACGGGGATCGTGG
TGACCATCGCGCCGGGGACGAAAGACGAATCGGTGCATATCCCCGTGATTCTCAGCCAGGCAGGCCTCTACGATGTGGTT
TACAACAACTTCATCATCGGCGATGGGGCGGACGTGACCATCGTGGCGGGCTGCGGCATCCACTGCGGGACGGCCAGCCC
GGAAGGGCACGCGGGCATCCATGAATTCCGCGTCGGCAAAGGGGCAAAGGTGAAATACGTGGAGAAGCATTACGCCACGG
GTGCTGGATCGGGCAGGCGGACGCTCAATCCCACGACGAAGGTTTTTCTTGCGGAAGGGGCGCAGGCGGAAATGGAACTG
ACCCAGATCGGCGGCGTGGATGAGGCCAATCGCGTCAATGAAGCGACCCTGGAGGCGAACAGCCTGCTGATGATCATGGA
GCGCGTCCTGACGGAGAAGGAGCAGTCGGCCGTATCGAAAAATGAAATCAGGCTGGCGGGCGACAACAGCCGGGCCAACA
TGATTTCCCGTTCCGTCATCAAGGGAAACTCCAATCAGAATTTCTACGCAACCATCGAGGCCCTGGCGAAATGCTTCGGT
CACATCGAATGCGACGCCATCATCATGGACAACGGAACCAACGAGACCATCCCCTCTCTGAAGGCCAAACACTCTGACGC
CGAACTCACCCACGAGGCTTCCATCGGCAAGATCGCCAGCGACCAGCTCATGAAGCTCATGAGCCTCGGCCTTTCCTACG
ACGACGCCGTCAACCGCATCATCCAGGGCTTCCTGAAGTAG

Upstream 100 bases:

>100_bases
GGGCAGTTTGTTTTCCGCGGCACCCTGGACGAAGCACTGCCCCTGCTCAACGATCTGAGTATCTGTAATTTCAAACCCTG
CTGCGAAGGAGAGGAACACA

Downstream 100 bases:

>100_bases
AAAGCGAGGGGTGAGGAGAGATAAATCGCAATGAAAATAGAGAATCTGATGGTGACAGGGGGCTGCGGGTTTATCGGCAG
CAACTTTATTCGATATCTGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGTKDESVHIPVILSQAGLYDVV
YNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRVGKGAKVKYVEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMEL
TQIGGVDEANRVNEATLEANSLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALAKCFG
HIECDAIIMDNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNRIIQGFLK

Sequences:

>Translated_306_residues
MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGTKDESVHIPVILSQAGLYDVV
YNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRVGKGAKVKYVEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMEL
TQIGGVDEANRVNEATLEANSLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALAKCFG
HIECDAIIMDNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNRIIQGFLK
>Mature_306_residues
MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGTKDESVHIPVILSQAGLYDVV
YNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRVGKGAKVKYVEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMEL
TQIGGVDEANRVNEATLEANSLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALAKCFG
HIECDAIIMDNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNRIIQGFLK

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=224, Percent_Identity=27.2321428571429, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 32701; Mature: 32701

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGT
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCC
KDESVHIPVILSQAGLYDVVYNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRVGK
CCCCEEEEEEEECCCEEEHHHCCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHEECCC
GAKVKYVEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMELTQIGGVDEANRVNEATLEAN
CCEEEEEHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCHHHHCHH
SLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALAKCFG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHC
HIECDAIIMDNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNRI
CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
IQGFLK
HHHHCC
>Mature Secondary Structure
MLDALDKDLLKAVADLEDIPKGAYNIRKNGKLLTRATTANIDIESNADGTGIVVTIAPGT
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCC
KDESVHIPVILSQAGLYDVVYNNFIIGDGADVTIVAGCGIHCGTASPEGHAGIHEFRVGK
CCCCEEEEEEEECCCEEEHHHCCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHEECCC
GAKVKYVEKHYATGAGSGRRTLNPTTKVFLAEGAQAEMELTQIGGVDEANRVNEATLEAN
CCEEEEEHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEHHHCCCCCCCCCCCHHHHCHH
SLLMIMERVLTEKEQSAVSKNEIRLAGDNSRANMISRSVIKGNSNQNFYATIEALAKCFG
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHC
HIECDAIIMDNGTNETIPSLKAKHSDAELTHEASIGKIASDQLMKLMSLGLSYDDAVNRI
CCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
IQGFLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]