Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859125

Identifier: 85859125

GI number: 85859125

Start: 1303027

End: 1304421

Strand: Direct

Name: 85859125

Synonym: SYN_01506

Alternate gene names: NA

Gene position: 1303027-1304421 (Clockwise)

Preceding gene: 85859124

Following gene: 85859145

Centisome position: 40.98

GC content: 50.82

Gene sequence:

>1395_bases
TTGTTGTTAACCGGTATAGTTATTGTGTATCGACATGAAATAACCGATATGGCGGTTAATATGATCGAATCAGGAAAAAT
AATTGAAATATTAAATAAGTACAATTCATACTGGTCAACGGGGACGATATCATGCGGGATTCGCCGCGATATGCTGGATT
CCTGCACACGGCAACTGGACGCAAAGGAGATCCTGCTGCTGAAGGGCATCCGTCGCAGCGGAAAGTCAACCCTCATGGCC
CAGATGATCGGCGCTCTTCTGGAAGCGGGGATTCGACCGGTGCAGATTCTGCGGGTTAACCTCGAAGAGCCGCTTTTTTC
CACGGATGCTTCTCTTGATTTTCTGGAGCGAATATACAGACTTTATCGAGACCGAATCTGTCCCGCGGGGCGCTGCTACC
TGTTTCTTGACGAAATTCAGAATATCCCGGAGTGGGAGCGCTGGGTTCGGGGGCGTAACGAGACCGAGGACATAAAGATT
GTCCTGACCGGCTCTTCTTCGGAACTGCTCAGCAGAGAAACAGGCACAAAGCTGACGGGTCGTCACCTGTCGTTTACGGT
TTTTCCCCTGTCCTTTCAGGAATTCCTCCGTTTTAGAAATATCATGATCACTTCCCGGGAAGATTATTATGCCAACAAGC
CTCTGGTGCGTCATCTTTTCTCCGAATATCTCCGTTACGGGGGATTTCCGGAAGTTGTCCTGAAGGAGGCGGTGGAAGAC
AAGGAGCTCCTGCTGTGGCAGTACTTCGAGGACATCGTCTATCGGGATATCGTATCGAAATACGGGATACGGGATGCCGT
GACGCTCAGAAATCTGGCCGTATACCTGATGACGAACATCGGGCGCCTGACGAGTATTTCCAATCTCAAGAAGACCTTCG
GCGTTTCCCAGGATAAAATCGAGAATTACGCGGCGGCTCTTCTTGAAACCTGTCTTGCCCATCGGGTGTCGAAATTTTCC
TGGTCCCTGAAGCGCAGCCTCCGGGAACGTTTCAATATCTACGCTGTCGACACGGGACTTCGCAACCGGGTTGCCTTTTC
TTTCTCCGAGGATTCCGGCTGGCTGGTGGAGAATGTTGTACTGAATTTTTTGAAGAGTCAATTTGAAGAAATTTATTTCG
AAAGCAACGGCGGCGAGATTGATTTCGTCATCAAGGAAGGTGTGGACCTGACGCATCGCCTTCAGGTCTGGTACGCCGAT
CCAGCCGATACGGATATCCCGGAGAGAGAACTTCGGTGCTGGACCGGCTCGAAGACCTCGCATGAGGAAGCCCGGCCGTC
GCGGACAGAACGGATCCGGAATATCCTGATCACCAACGATCTCGAAAAGGAACTGGTGCTGGGTGAGACGAAAGTTGAGT
GTCTGCCCGTAATCCTTTTTCTTCTGGGCAAATAG

Upstream 100 bases:

>100_bases
GTCGCCTCTTTACCGGCATTGAATAAAGAAGGAAAACGCCCTGTTTTCTTAATGAAAAAAATGAGCGCTGTCCCTGTTTA
TTTCTGTTTATTTTGTTTAT

Downstream 100 bases:

>100_bases
GGGCGGCGCCTGCATAGTATGGGCGCTGTCCCTCTTTTTCTCCTGCCTGGCGGGAGACCACAATTCCGACCACGGGGAAC
TGTCGGAGAGATTTTTCAAT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA
QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI
VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED
KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS
WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD
PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK

Sequences:

>Translated_464_residues
MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA
QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI
VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED
KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS
WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD
PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK
>Mature_464_residues
MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLDAKEILLLKGIRRSGKSTLMA
QMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYRLYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKI
VLTGSSSELLSRETGTKLTGRHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED
KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKIENYAAALLETCLAHRVSKFS
WSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVVLNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYAD
PADTDIPERELRCWTGSKTSHEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1544 and MJ1637 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53791; Mature: 53791

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLD
CCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHCC
AKEILLLKGIRRSGKSTLMAQMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
LYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKIVLTGSSSELLSRETGTKLTG
HHHHCCCCCCCCEEEEHHHCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC
RHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED
CCEEEEEECCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCH
KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ENYAAALLETCLAHRVSKFSWSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCHHHHHHH
LNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYADPADTDIPERELRCWTGSKTS
HHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEEECCCCCC
HEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK
CHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLTGIVIVYRHEITDMAVNMIESGKIIEILNKYNSYWSTGTISCGIRRDMLDSCTRQLD
CCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHCC
AKEILLLKGIRRSGKSTLMAQMIGALLEAGIRPVQILRVNLEEPLFSTDASLDFLERIYR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH
LYRDRICPAGRCYLFLDEIQNIPEWERWVRGRNETEDIKIVLTGSSSELLSRETGTKLTG
HHHHCCCCCCCCEEEEHHHCCCCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC
RHLSFTVFPLSFQEFLRFRNIMITSREDYYANKPLVRHLFSEYLRYGGFPEVVLKEAVED
CCEEEEEECCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCH
KELLLWQYFEDIVYRDIVSKYGIRDAVTLRNLAVYLMTNIGRLTSISNLKKTFGVSQDKI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHH
ENYAAALLETCLAHRVSKFSWSLKRSLRERFNIYAVDTGLRNRVAFSFSEDSGWLVENVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCHHHHHHH
LNFLKSQFEEIYFESNGGEIDFVIKEGVDLTHRLQVWYADPADTDIPERELRCWTGSKTS
HHHHHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHEEECCCCCC
HEEARPSRTERIRNILITNDLEKELVLGETKVECLPVILFLLGK
CHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]