Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yhbJ [C]

Identifier: 85859062

GI number: 85859062

Start: 1234225

End: 1235148

Strand: Direct

Name: yhbJ [C]

Synonym: SYN_00941

Alternate gene names: 85859062

Gene position: 1234225-1235148 (Clockwise)

Preceding gene: 85859061

Following gene: 85859074

Centisome position: 38.82

GC content: 48.7

Gene sequence:

>924_bases
ATGCCCGGTGGCGGAAATGGAATCCTGTATTCGAACCTTGCAGCGGTTAAGGAGATGAAGATGAATAACCTTCGCGTAGT
CATTATTACCGGTCTTTCCGGTTCAGGGAAAAGCACGGCGTTAAGAGCACTGGAGGATATCGGTTTTTATTGCGTGGACA
ATATGCCCGTTGTCCTGCTGCCGCAGTTTCTGGAAATCCAGTCCGACAAATCAAAGGATATCTCTCAAGTGGCCATGGTG
ATGGACTTGAGGGAAAAATCATTTATCGAAACTTATAAGGGCATCTTCGAACAGATCAAAGCCCGGGGTTATAAGATCGA
GATCGTTTTTCTCTATGCCACCGACGACGCTCTGCTGCATCGCTTCAGCGAAACGAGAAGGGTTCACCCTTTGTCGAGTG
TTTCGATCATGGAAGGGATTCGTCTGGAGCGCGAGCAGCTTCGCGCCCTGGAGGAAATGGCCGATAAGGTGATTGATACG
ACTTCCTGCAATGTCCATCAGTTAAAGGATATCGTCCAGCGTCATTTTCTGCCTTCCTCCACGGCCAGACGGTTGTTTAT
TCATCTGATCTCTTTCGGCTATCGTTACGGTCTCCCGGCCGATGCCGATTTGGTTCTGGATGTTCGTTTTCTTCCCAATC
CCTATTGGGTTGAAAGCTTAAAATCCTTCAATGGTCACCATCAGGATGTTCGGCGGTATGTTCTGAGTGCTGAAGCGAGT
TCCATCTTTCTTCAGAAGCTGTTCGACCTGATGGAATTTTTGATTCCTCTTTATGAAAAGGAAGGAAAACCACGAATAAC
CATTGCCGTGGGATGCACGGGGGGGAAGCATCGCTCCGTTGTCATGGCGAATGAATTGTGGTCCTACTTTTCCGGCCGGG
ATTATCCGGTAAACGTGAACCACCGCGACGTTGGTAAAAGCTGA

Upstream 100 bases:

>100_bases
CGGATAAGAATAGAGAGTCGGGCAAGCCTTCCAAGGTTCTGAAGAATATCATGGGAGTTGATCTGCCCTGTGTCTCGATA
AGGGCTTCAAGGGATGCTTC

Downstream 100 bases:

>100_bases
TGGCTCATCGCGACAACCTGCTTTTCAAAGAATGACGGTTTTTAAAAAACTAAAAACTCACCGCCATTTTTCGCAGGACA
TTGTCCTGAATCCAGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLLPQFLEIQSDKSKDISQVAMV
MDLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLHRFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDT
TSCNVHQLKDIVQRHFLPSSTARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEAS
SIFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVNHRDVGKS

Sequences:

>Translated_307_residues
MPGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLLPQFLEIQSDKSKDISQVAMV
MDLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLHRFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDT
TSCNVHQLKDIVQRHFLPSSTARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEAS
SIFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVNHRDVGKS
>Mature_306_residues
PGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLLPQFLEIQSDKSKDISQVAMVM
DLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLHRFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDTT
SCNVHQLKDIVQRHFLPSSTARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEASS
IFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVNHRDVGKS

Specific function: Displays ATPase and GTPase activities [H]

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family [H]

Homologues:

Organism=Escherichia coli, GI1789598, Length=286, Percent_Identity=39.5104895104895, Blast_Score=203, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005337 [H]

Pfam domain/function: PF03668 ATP_bind_2 [H]

EC number: NA

Molecular weight: Translated: 34884; Mature: 34753

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLL
CCCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEC
PQFLEIQSDKSKDISQVAMVMDLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHH
RFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDTTSCNVHQLKDIVQRHFLPSS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
TARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEAS
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
SIFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEECCC
HRDVGKS
CCCCCCC
>Mature Secondary Structure 
PGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLL
CCCCCCEEHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEC
PQFLEIQSDKSKDISQVAMVMDLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLH
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHH
RFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDTTSCNVHQLKDIVQRHFLPSS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
TARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEAS
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
SIFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHCCCCCEECCC
HRDVGKS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA