| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858875
Identifier: 85858875
GI number: 85858875
Start: 1058504
End: 1058851
Strand: Direct
Name: 85858875
Synonym: SYN_01315
Alternate gene names: NA
Gene position: 1058504-1058851 (Clockwise)
Preceding gene: 85858866
Following gene: 85858878
Centisome position: 33.29
GC content: 44.54
Gene sequence:
>348_bases ATGGCATTGGAATCGTTTGCTATCGATAATTATGAGGTTCACTTGGTTGCGCCTAATAATCCAGAATTTCCCGATGTCTA TGGGTTTATCCATCTTTACTGGCAGGAGAAGCGACGGGCAACGCTTTGGTTTTATCGAGATGGCGTCGCCACAATTCCTG CCAACACCTTGTCCAGTTCCAGCGGTGATTTGATCTATAATGCTTATTTTGGACAAGCAGCTCTTCACGACAGCATCGAT CTTTTAAGGAACGAGTCTGTATTTTTCCAATGGGATGAAGCTTCAAGGGCCGTACTTATTACCACAGGACAAGAACCAGT CGGCGAAGCGGAGTTGTCTTATAAATAA
Upstream 100 bases:
>100_bases TTTCTCATCCATTTCTCTTTATTTCGTTGACATGACAGCCTATATTTCTTAGTATTTAGCTATATTTTGTTAAACTCTTT AAAGGAAAGGAGGCCATTAA
Downstream 100 bases:
>100_bases AAGGAGTTAAACACGTAAGTTCCTGCAGAGGATTTTTGAGAATTCTAATGGCTGCAGCGGAATAAAAAGGCTCCGGTTTT ATGTTAGATGTTAATTCTTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MALESFAIDNYEVHLVAPNNPEFPDVYGFIHLYWQEKRRATLWFYRDGVATIPANTLSSSSGDLIYNAYFGQAALHDSID LLRNESVFFQWDEASRAVLITTGQEPVGEAELSYK
Sequences:
>Translated_115_residues MALESFAIDNYEVHLVAPNNPEFPDVYGFIHLYWQEKRRATLWFYRDGVATIPANTLSSSSGDLIYNAYFGQAALHDSID LLRNESVFFQWDEASRAVLITTGQEPVGEAELSYK >Mature_114_residues ALESFAIDNYEVHLVAPNNPEFPDVYGFIHLYWQEKRRATLWFYRDGVATIPANTLSSSSGDLIYNAYFGQAALHDSIDL LRNESVFFQWDEASRAVLITTGQEPVGEAELSYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13082; Mature: 12950
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALESFAIDNYEVHLVAPNNPEFPDVYGFIHLYWQEKRRATLWFYRDGVATIPANTLSSS CCCCCEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEECCEEECCCCCCCCC SGDLIYNAYFGQAALHDSIDLLRNESVFFQWDEASRAVLITTGQEPVGEAELSYK CCCEEEEEECCCCHHHCCHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCEECCC >Mature Secondary Structure ALESFAIDNYEVHLVAPNNPEFPDVYGFIHLYWQEKRRATLWFYRDGVATIPANTLSSS CCCCEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEECCEEECCCCCCCCC SGDLIYNAYFGQAALHDSIDLLRNESVFFQWDEASRAVLITTGQEPVGEAELSYK CCCEEEEEECCCCHHHCCHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA