Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858836

Identifier: 85858836

GI number: 85858836

Start: 1027924

End: 1028883

Strand: Direct

Name: 85858836

Synonym: SYN_00407

Alternate gene names: NA

Gene position: 1027924-1028883 (Clockwise)

Preceding gene: 85858834

Following gene: 85858837

Centisome position: 32.33

GC content: 52.4

Gene sequence:

>960_bases
TTGCTCAAGTTGGTCACAGATCTTAAGAGAGATTATTCTCAGACGGAGGTTTTCATGAAAAAGAAAGTGATGTCCGGAAT
GCAGATTTTCATCCTCTTCCTGCTGTTCTCTATAACTCTCCCATTAAACGCCGGTGCCGCGGATCGCACTGTCATTGACA
TTTCCGACGAGGTACGCCGCTCTCTCATCGTCTGCGCGGAGGGCTCTGCCCCTTCAGCGACGGATAAATCGTCTCTGGAA
AAATGGCGGACGCAGGCCCTGAAGGAAGCGAAGACGGCTGTTCTGGCCAAAGCCAGGACGTTCCTGAATGAAAAAAAGAA
ACAGAATCGAGATTTTGATTATCGTCTGACGGGTACTGCGATCCGGATCTTGAACAAAAAAGAAATGGCGCAATGGAGTA
AGGGGAACCGCGGGATTTGGATTGAAGCGGAAGTTCCTTACACCCCGAAGACTTTTCCGGCCGATGATTGTTCCCAGCCG
ACCCTTGAGCGGCATTCCGGGGAAATGCTGGACGTGCGACTCTGGACTGATCCGGGGCTGCTTCGGGACGGCAAGGCAGT
CACCGTGTATTTCAGGAGCAATCGTGATTTTTATGGCCGCATTATTCGTATCGGCAGCCGGGGGGAAGTGGAACAACTGC
TTCCCAACATCTACCGGCAGACTTCTTTATTCAAAGCAGGGGTTGTCTATCGGATCCCTGATGAGGGCGACCGCTTTAAA
CTCAACAGAACCCAGTCTTCGGGAAGTGAACGCTGGGTGATCTATGCCACCCCGGTTTCCATGGGGCAGATCAACATGAA
GATCATTGCCGGCGGCCGATACCAGTACCGGGGAAAACTGAAGTCCTTCGAACGCAGTGTCCGTTGCGGCCTCTGTCAGC
CGGATGGCGGGGTGGTTGAGTTTTATGAAGCAGTCTGGAACATGCAGGCTCGGGAGGTAGATGCGCCGAAAACAAAATAA

Upstream 100 bases:

>100_bases
TTGCAATCAGAAGACTGATAAGGCGGGAAAGTGACTGAATGTCGGGAACCGCGGACTGAGCCTGAAAACGGCAATCTGGC
ATGAAAATCTCATACACGAT

Downstream 100 bases:

>100_bases
ACAGGATATGAACATAGTCATATTGACAAGACGAAAATCATGTTTATAATTCCATTAAATTTTCAGGACGCCTGAAGGAG
TGGAAGGGATATCATGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLKLVTDLKRDYSQTEVFMKKKVMSGMQIFILFLLFSITLPLNAGAADRTVIDISDEVRRSLIVCAEGSAPSATDKSSLE
KWRTQALKEAKTAVLAKARTFLNEKKKQNRDFDYRLTGTAIRILNKKEMAQWSKGNRGIWIEAEVPYTPKTFPADDCSQP
TLERHSGEMLDVRLWTDPGLLRDGKAVTVYFRSNRDFYGRIIRIGSRGEVEQLLPNIYRQTSLFKAGVVYRIPDEGDRFK
LNRTQSSGSERWVIYATPVSMGQINMKIIAGGRYQYRGKLKSFERSVRCGLCQPDGGVVEFYEAVWNMQAREVDAPKTK

Sequences:

>Translated_319_residues
MLKLVTDLKRDYSQTEVFMKKKVMSGMQIFILFLLFSITLPLNAGAADRTVIDISDEVRRSLIVCAEGSAPSATDKSSLE
KWRTQALKEAKTAVLAKARTFLNEKKKQNRDFDYRLTGTAIRILNKKEMAQWSKGNRGIWIEAEVPYTPKTFPADDCSQP
TLERHSGEMLDVRLWTDPGLLRDGKAVTVYFRSNRDFYGRIIRIGSRGEVEQLLPNIYRQTSLFKAGVVYRIPDEGDRFK
LNRTQSSGSERWVIYATPVSMGQINMKIIAGGRYQYRGKLKSFERSVRCGLCQPDGGVVEFYEAVWNMQAREVDAPKTK
>Mature_319_residues
MLKLVTDLKRDYSQTEVFMKKKVMSGMQIFILFLLFSITLPLNAGAADRTVIDISDEVRRSLIVCAEGSAPSATDKSSLE
KWRTQALKEAKTAVLAKARTFLNEKKKQNRDFDYRLTGTAIRILNKKEMAQWSKGNRGIWIEAEVPYTPKTFPADDCSQP
TLERHSGEMLDVRLWTDPGLLRDGKAVTVYFRSNRDFYGRIIRIGSRGEVEQLLPNIYRQTSLFKAGVVYRIPDEGDRFK
LNRTQSSGSERWVIYATPVSMGQINMKIIAGGRYQYRGKLKSFERSVRCGLCQPDGGVVEFYEAVWNMQAREVDAPKTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36391; Mature: 36391

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLVTDLKRDYSQTEVFMKKKVMSGMQIFILFLLFSITLPLNAGAADRTVIDISDEVRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCC
SLIVCAEGSAPSATDKSSLEKWRTQALKEAKTAVLAKARTFLNEKKKQNRDFDYRLTGTA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCE
IRILNKKEMAQWSKGNRGIWIEAEVPYTPKTFPADDCSQPTLERHSGEMLDVRLWTDPGL
EEEECHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCC
LRDGKAVTVYFRSNRDFYGRIIRIGSRGEVEQLLPNIYRQTSLFKAGVVYRIPDEGDRFK
EECCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE
LNRTQSSGSERWVIYATPVSMGQINMKIIAGGRYQYRGKLKSFERSVRCGLCQPDGGVVE
EEECCCCCCCEEEEEECCCCCCEEEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCCHHH
FYEAVWNMQAREVDAPKTK
HHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure
MLKLVTDLKRDYSQTEVFMKKKVMSGMQIFILFLLFSITLPLNAGAADRTVIDISDEVRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCC
SLIVCAEGSAPSATDKSSLEKWRTQALKEAKTAVLAKARTFLNEKKKQNRDFDYRLTGTA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCE
IRILNKKEMAQWSKGNRGIWIEAEVPYTPKTFPADDCSQPTLERHSGEMLDVRLWTDPGL
EEEECHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCC
LRDGKAVTVYFRSNRDFYGRIIRIGSRGEVEQLLPNIYRQTSLFKAGVVYRIPDEGDRFK
EECCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE
LNRTQSSGSERWVIYATPVSMGQINMKIIAGGRYQYRGKLKSFERSVRCGLCQPDGGVVE
EEECCCCCCCEEEEEECCCCCCEEEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCCHHH
FYEAVWNMQAREVDAPKTK
HHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA