Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858811

Identifier: 85858811

GI number: 85858811

Start: 1000268

End: 1002778

Strand: Direct

Name: 85858811

Synonym: SYN_01464

Alternate gene names: NA

Gene position: 1000268-1002778 (Clockwise)

Preceding gene: 85858809

Following gene: 85858812

Centisome position: 31.46

GC content: 46.63

Gene sequence:

>2511_bases
ATGAAATTACCGTTTGGTTTTTCAAATAAAAACAGGCGATTTTTAATCGTAGCCATCCTTTGTAGCATGGGGTGGGTCCT
GTGGCCGCACCTCACCTGTCACGGGGAAACAAACCGGCAGGATATTCACGCGAGACGCGTATCCTCCTATCAGAATGTCG
ATGGTGCGAAACAAGAGGTTAATTTATTAAAATCGAGAGGTTACAATGCATACCTTGAAAAGGTCCTGATTCCTGACAAG
GGAGTCTGGTACCGGGTTTTTATCATGAAAGGTCCGCCGGCGTCACGGAGTCGGGTTTCTGTCGAAAGGAAAAAAAAGAA
ACCTGTAAAGGTCCGGCCGTCGACAAATGACCCTGATTCCAGGGTAAAAATGATTCATCGTCCCGCCCGTAAGCAGGTCC
CGGATTTTTCGGATCAAGGCATTCGAGATTCTTCCCTTCAACGGCAAACAATCCTGCAAAAAAATGTCATTCCCGATACT
GACAATGAAAATGAGGCGCACTTGCCCAAACGGAAGACGGGCAGAGAATCGGATGTGAAAAACAGTCTGGATAGTCCGTC
CCCTCGTGTATTTGAAACGGCAAACATTCACTTCGATGCGTGTCGTTACGAAAGGGCTGCCGCGATTCTGTCTTCGATCG
TTTCAAAGAAGCATAATGACGATGCATTGCTGGAAAACAGTCTGAGGCTTCTTGCGGACTGTTACTTTTTTCTGGGAAAA
GGGAAGGATGGAAGTTTCAATCTGAAAGCCGTTGACGCATATAAACATATACTCCGTCGCTATCCGGACTTGCGAAGCAG
AAACGATCTGGTGAATTTCCGCCTGGCAGAATGCCTGGAACAGGCTGGAAACTATGAGGAGGCTTATGCGGCCTATGAGG
ATGTCATTCGGAAATATCCGACTTCAAGGTACAAGCAGGATGTGTTGTACAAAATGGGAGAAATTCTCTATCGGACCGGA
CGTTTTACCCATGCGATCGAGAAGCTGAGGAATTACCTGGCCGGATATCCCGATGGTCCTTACGCTTCCAGGTCTTCTTT
CCTGCTGGGCTACTGTTTTCAACAAACCGGCAGACAGACCGATGGCGCGCTCTGGTATCGGAACGCACTCAACAAGTGGG
ATAACTTCGAAGAATTGCCTGCAGATGTCCTTTATGATCTGGGGCTTACCCTCTTTTCCTGGCAGGATTACTCAAGGGCG
GCTTCCCTGTTTGCCACTTATCTCAACCTCTACCCGGAAGGGGGCTCGAAAAAAAGTGCCATGTTTTATCTGGGCCGTTC
TTTTTATACCCTGAACCGCTTCGCTTCGGCCTTGAAAGTCTTCAGCCTCCTGCTGGAAAACTATCCAGAAAGCGGGGAAG
CTTATGAAAGCATTCTTTTTATGGCAAATATCGGCGTTATGGAGCCGACGATGAACTTCAATGTCTGCATGACGGGATGG
GATTATTACAGAAATCCAGTTGGGACATATGATTGGATGAGGAGGAAATTCCCCGGCGGCAGATTGGAGGAATGGCTGCT
TTATCAAAAGGGATATGCCCTGTGGAAAGCGGGTCGCTGCAAAGAGGCCTTCGACCTCTATTGCCATCTTCTCGATTCTT
ACACCCATGGAGATTTTAAGGATAAAAGCCGGGGGTATCTGTTTTTGAATGCAAGGCGATTGATTGAGGAGGCTTATGGA
AGGGGTGATGACCTCGCTGTAGCCGATATTTATTATAAGATTCACAACAAAATTTCTCTTTCTGCTGAAACACGGGATCT
GTTCTCCAGAGCAGGTGTCAGTCTCCGGAAATTGGGATTTCTCTCAGACGCATCTTCTGTATGGAACAGTCTCAGGCAGC
ATGGGCTGAATGCTTCAGGCGCGGCTGTTCTGGAACTCATGGTGGTGGAGGATCCTGGAATCCGGAAGGGGAATGATGTT
CCAGAGGAAAAATGGAATGCCCTGATGAAGCAATTTACAGAAAATGACGGCATTCTGAAAGAGACGGCAATAAAAAACCT
GGCTGATTATTTTTACCTAAAAGGGCGATATGATAGGGCTGTTTCCTTATATAAAATATTGCTCGAAGGAAAAGACAATC
CCGATCTTCTGACGATTAAGGGAAATTATGCCCACGCGTTGAAAAGTAACAACGACTGTGCTTCAGCTATAAAAATTTAT
CAGAAGATTATTCATGAATATCGGGACAGCCCGCAGAATTATGAGGAAGAGCTCATCACTGAAGCCTATGCGGGGTTGGT
GGACTGTTATTTCGAAAACACCGACTATCAGCGTGGCATAGCTGCCTCTCAACAGGCTGTTCCACGGATGAAAAATCAAC
AAAAGCAGATGTGGACCCTTTTCAGAACGGGGCAGAGTTACAGAAAAATGGACGACATGACCATGATGGAAAAAACATTT
TCCGAGTTAAAGGAAAAAGGCGATGAGACATTCTGGCCGAAGGTCGTGGATTACTGGGTTGCCGATCAGGCGTGGTCTGA
AAACAACATAACGTACATGAGTAGTAATTAA

Upstream 100 bases:

>100_bases
AAGGCAGTGTGAAAGACGGAAATTTAAGATACCATTGTTGGATCATTTTTCATAGAAAAATTTTTCCCATGCAGACAGTT
TCTGCACTTTTTCATTTGTG

Downstream 100 bases:

>100_bases
AATTACTGGATCAAGCATGAATGACATTGCATCGTTACAGAAATCTTTCGAAGGGTTCAATCAGGCGACTTTGCATATTC
AGCAGGCTTTTGCGAGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MKLPFGFSNKNRRFLIVAILCSMGWVLWPHLTCHGETNRQDIHARRVSSYQNVDGAKQEVNLLKSRGYNAYLEKVLIPDK
GVWYRVFIMKGPPASRSRVSVERKKKKPVKVRPSTNDPDSRVKMIHRPARKQVPDFSDQGIRDSSLQRQTILQKNVIPDT
DNENEAHLPKRKTGRESDVKNSLDSPSPRVFETANIHFDACRYERAAAILSSIVSKKHNDDALLENSLRLLADCYFFLGK
GKDGSFNLKAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTG
RFTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQTDGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRA
ASLFATYLNLYPEGGSKKSAMFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMNFNVCMTGW
DYYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHLLDSYTHGDFKDKSRGYLFLNARRLIEEAYG
RGDDLAVADIYYKIHNKISLSAETRDLFSRAGVSLRKLGFLSDASSVWNSLRQHGLNASGAAVLELMVVEDPGIRKGNDV
PEEKWNALMKQFTENDGILKETAIKNLADYFYLKGRYDRAVSLYKILLEGKDNPDLLTIKGNYAHALKSNNDCASAIKIY
QKIIHEYRDSPQNYEEELITEAYAGLVDCYFENTDYQRGIAASQQAVPRMKNQQKQMWTLFRTGQSYRKMDDMTMMEKTF
SELKEKGDETFWPKVVDYWVADQAWSENNITYMSSN

Sequences:

>Translated_836_residues
MKLPFGFSNKNRRFLIVAILCSMGWVLWPHLTCHGETNRQDIHARRVSSYQNVDGAKQEVNLLKSRGYNAYLEKVLIPDK
GVWYRVFIMKGPPASRSRVSVERKKKKPVKVRPSTNDPDSRVKMIHRPARKQVPDFSDQGIRDSSLQRQTILQKNVIPDT
DNENEAHLPKRKTGRESDVKNSLDSPSPRVFETANIHFDACRYERAAAILSSIVSKKHNDDALLENSLRLLADCYFFLGK
GKDGSFNLKAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTG
RFTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQTDGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRA
ASLFATYLNLYPEGGSKKSAMFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMNFNVCMTGW
DYYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHLLDSYTHGDFKDKSRGYLFLNARRLIEEAYG
RGDDLAVADIYYKIHNKISLSAETRDLFSRAGVSLRKLGFLSDASSVWNSLRQHGLNASGAAVLELMVVEDPGIRKGNDV
PEEKWNALMKQFTENDGILKETAIKNLADYFYLKGRYDRAVSLYKILLEGKDNPDLLTIKGNYAHALKSNNDCASAIKIY
QKIIHEYRDSPQNYEEELITEAYAGLVDCYFENTDYQRGIAASQQAVPRMKNQQKQMWTLFRTGQSYRKMDDMTMMEKTF
SELKEKGDETFWPKVVDYWVADQAWSENNITYMSSN
>Mature_836_residues
MKLPFGFSNKNRRFLIVAILCSMGWVLWPHLTCHGETNRQDIHARRVSSYQNVDGAKQEVNLLKSRGYNAYLEKVLIPDK
GVWYRVFIMKGPPASRSRVSVERKKKKPVKVRPSTNDPDSRVKMIHRPARKQVPDFSDQGIRDSSLQRQTILQKNVIPDT
DNENEAHLPKRKTGRESDVKNSLDSPSPRVFETANIHFDACRYERAAAILSSIVSKKHNDDALLENSLRLLADCYFFLGK
GKDGSFNLKAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYPTSRYKQDVLYKMGEILYRTG
RFTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQTDGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRA
ASLFATYLNLYPEGGSKKSAMFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMNFNVCMTGW
DYYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHLLDSYTHGDFKDKSRGYLFLNARRLIEEAYG
RGDDLAVADIYYKIHNKISLSAETRDLFSRAGVSLRKLGFLSDASSVWNSLRQHGLNASGAAVLELMVVEDPGIRKGNDV
PEEKWNALMKQFTENDGILKETAIKNLADYFYLKGRYDRAVSLYKILLEGKDNPDLLTIKGNYAHALKSNNDCASAIKIY
QKIIHEYRDSPQNYEEELITEAYAGLVDCYFENTDYQRGIAASQQAVPRMKNQQKQMWTLFRTGQSYRKMDDMTMMEKTF
SELKEKGDETFWPKVVDYWVADQAWSENNITYMSSN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96632; Mature: 96632

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPFGFSNKNRRFLIVAILCSMGWVLWPHLTCHGETNRQDIHARRVSSYQNVDGAKQEV
CCCCCCCCCCCCCEEHHHHHHHCCHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHH
NLLKSRGYNAYLEKVLIPDKGVWYRVFIMKGPPASRSRVSVERKKKKPVKVRPSTNDPDS
HHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEECCCCCCHHH
RVKMIHRPARKQVPDFSDQGIRDSSLQRQTILQKNVIPDTDNENEAHLPKRKTGRESDVK
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
NSLDSPSPRVFETANIHFDACRYERAAAILSSIVSKKHNDDALLENSLRLLADCYFFLGK
HCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
GKDGSFNLKAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYP
CCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
TSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQT
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC
DGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRAASLFATYLNLYPEGGSKKSA
CCHHHHHHHHHHCCCHHHCHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
MFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMNFNVCMTGW
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECH
DYYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHLLDSYTHGDFK
HHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
DKSRGYLFLNARRLIEEAYGRGDDLAVADIYYKIHNKISLSAETRDLFSRAGVSLRKLGF
CCCCCEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHC
LSDASSVWNSLRQHGLNASGAAVLELMVVEDPGIRKGNDVPEEKWNALMKQFTENDGILK
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
ETAIKNLADYFYLKGRYDRAVSLYKILLEGKDNPDLLTIKGNYAHALKSNNDCASAIKIY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHH
QKIIHEYRDSPQNYEEELITEAYAGLVDCYFENTDYQRGIAASQQAVPRMKNQQKQMWTL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
FRTGQSYRKMDDMTMMEKTFSELKEKGDETFWPKVVDYWVADQAWSENNITYMSSN
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MKLPFGFSNKNRRFLIVAILCSMGWVLWPHLTCHGETNRQDIHARRVSSYQNVDGAKQEV
CCCCCCCCCCCCCEEHHHHHHHCCHHHHCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHH
NLLKSRGYNAYLEKVLIPDKGVWYRVFIMKGPPASRSRVSVERKKKKPVKVRPSTNDPDS
HHHHHCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEECCCCCCHHH
RVKMIHRPARKQVPDFSDQGIRDSSLQRQTILQKNVIPDTDNENEAHLPKRKTGRESDVK
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
NSLDSPSPRVFETANIHFDACRYERAAAILSSIVSKKHNDDALLENSLRLLADCYFFLGK
HCCCCCCCCEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
GKDGSFNLKAVDAYKHILRRYPDLRSRNDLVNFRLAECLEQAGNYEEAYAAYEDVIRKYP
CCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
TSRYKQDVLYKMGEILYRTGRFTHAIEKLRNYLAGYPDGPYASRSSFLLGYCFQQTGRQT
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCC
DGALWYRNALNKWDNFEELPADVLYDLGLTLFSWQDYSRAASLFATYLNLYPEGGSKKSA
CCHHHHHHHHHHCCCHHHCHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
MFYLGRSFYTLNRFASALKVFSLLLENYPESGEAYESILFMANIGVMEPTMNFNVCMTGW
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECH
DYYRNPVGTYDWMRRKFPGGRLEEWLLYQKGYALWKAGRCKEAFDLYCHLLDSYTHGDFK
HHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
DKSRGYLFLNARRLIEEAYGRGDDLAVADIYYKIHNKISLSAETRDLFSRAGVSLRKLGF
CCCCCEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHC
LSDASSVWNSLRQHGLNASGAAVLELMVVEDPGIRKGNDVPEEKWNALMKQFTENDGILK
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
ETAIKNLADYFYLKGRYDRAVSLYKILLEGKDNPDLLTIKGNYAHALKSNNDCASAIKIY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHH
QKIIHEYRDSPQNYEEELITEAYAGLVDCYFENTDYQRGIAASQQAVPRMKNQQKQMWTL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHH
FRTGQSYRKMDDMTMMEKTFSELKEKGDETFWPKVVDYWVADQAWSENNITYMSSN
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA