Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858770

Identifier: 85858770

GI number: 85858770

Start: 961633

End: 961761

Strand: Direct

Name: 85858770

Synonym: SYN_03462

Alternate gene names: NA

Gene position: 961633-961761 (Clockwise)

Preceding gene: 85858769

Following gene: 85858774

Centisome position: 30.25

GC content: 41.86

Gene sequence:

>129_bases
ATGGATGAGTACAATGAAAAAAGAACCCGCCAAGGAAAATGCTGCCAGGAAAGAACCACCATGGATACGTTTCGAGATGG
AATTAAGCTCTTTAGAGAGAAAAATTTGAGCGAAATGGCAGCAGCCTAA

Upstream 100 bases:

>100_bases
GAGAGTGCATCAGACCATTCCGCATGAATTTTAAAAGGTTGCCTTTAGAAAGAGGCTCTATACGGATCTGGAATCCTTGT
AAGCCGATCTGGATGCGTAT

Downstream 100 bases:

>100_bases
ACGCCGTCAACAATCCGGAAGCATCGGGCCACTGTCAACTCAAGTCTTGTTCAGGACAAATAATATGAATTGATTTCTCT
GTGAAGGACCATGGTAATTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MDEYNEKRTRQGKCCQERTTMDTFRDGIKLFREKNLSEMAAA

Sequences:

>Translated_42_residues
MDEYNEKRTRQGKCCQERTTMDTFRDGIKLFREKNLSEMAAA
>Mature_42_residues
MDEYNEKRTRQGKCCQERTTMDTFRDGIKLFREKNLSEMAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5003; Mature: 5003

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
11.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
11.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEYNEKRTRQGKCCQERTTMDTFRDGIKLFREKNLSEMAAA
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MDEYNEKRTRQGKCCQERTTMDTFRDGIKLFREKNLSEMAAA
CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA