Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858719

Identifier: 85858719

GI number: 85858719

Start: 897799

End: 898614

Strand: Direct

Name: 85858719

Synonym: SYN_00187

Alternate gene names: NA

Gene position: 897799-898614 (Clockwise)

Preceding gene: 85858718

Following gene: 85858720

Centisome position: 28.24

GC content: 58.82

Gene sequence:

>816_bases
ATGACCGTTGACCGCGCGTTCGGGTTATCCCGGGAGGATCGGGGAGGCCTGCGGCGCATGCTTGTTCTCTCTCTCCTTCT
CCATGCCTTTGCCCTGTCGCTGTTCTTCGTTTGCGTTCCGAAAGCCTCATCACCAAAGTTGACCTTTGGTCCCGATTATG
CCGTCAGTCTGGTCAGCTCCGCGGATCTGCGCATGGATGGCGGTAATTCTTCAAGGGAACTTGCGAAGGAACTGGCAGAC
ATTCCTGAACCTGAGCCTGCGACTCTGCCGGCGGCGCCGGCGAAGCCGGAGGGAAAAGTTTCCCGCAGCGAACCGGCTTC
CCTTTCTCCGGTGCCGGTCCGGAAGGTGGAACCGATGAAAAGACAGGATGGCGCCTTAGGAAAAGCCATAGAAGAGATTC
GCCGGCGGGTGGAATCAGCAGGGCAGAAGCAGGCCTCTGCCCCGGCCTATCCCGGCGGGGGAATAACTTCCGATTCTCCG
ATTGGCGGGAGTCCTGCCGGTGCGGTTGGTGATGCTGAACTCGGAGCCCGGATGAAGGCCTATTATGGCTCCATCTGGAT
GAGGATCAAAAGGCACTGGTCCATGCCGCCCGATCTGCTCCCGCGGCAGAATATCGAGGCGGTGATTCATGTCCGGATTC
TCCGCAGCGGAGCGGTTGAGGGGATCAGCTTCGAACAGCGTTCCGGGAATTCATATTTCGACGAATCCGCAATGCGCGCC
GTCCGCAAGGCGAGTCCCTTTCCTCCATTGCCGGAAGGAACAGGAGAGGAAGGCATCGAAATGGGCATCCGTTTTCATTC
ATCCGAACTGAGGTAG

Upstream 100 bases:

>100_bases
GAGCCATCCCTTATGGATTCGTTGTTGAGGTCATGGCGGAAGTCCGGAAAGCAGGCATCGATAAACTGGGCATGATTACC
GAACCGCCAGAGGAAGTAAA

Downstream 100 bases:

>100_bases
CCAACACCAGACACAATACTGCAAGAGGGATAAAGGGCGGCAGAAAGAAAGCGATGCTGCCGCATGGATCACACGACAGA
AGACCGGCACCGAAGCTGGC

Product: tolA protein

Products: NA

Alternate protein names: NB Family Protein

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTVDRAFGLSREDRGGLRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSSADLRMDGGNSSRELAKELAD
IPEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMKRQDGALGKAIEEIRRRVESAGQKQASAPAYPGGGITSDSP
IGGSPAGAVGDAELGARMKAYYGSIWMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNSYFDESAMRA
VRKASPFPPLPEGTGEEGIEMGIRFHSSELR

Sequences:

>Translated_271_residues
MTVDRAFGLSREDRGGLRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSSADLRMDGGNSSRELAKELAD
IPEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMKRQDGALGKAIEEIRRRVESAGQKQASAPAYPGGGITSDSP
IGGSPAGAVGDAELGARMKAYYGSIWMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNSYFDESAMRA
VRKASPFPPLPEGTGEEGIEMGIRFHSSELR
>Mature_270_residues
TVDRAFGLSREDRGGLRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSSADLRMDGGNSSRELAKELADI
PEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMKRQDGALGKAIEEIRRRVESAGQKQASAPAYPGGGITSDSPI
GGSPAGAVGDAELGARMKAYYGSIWMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNSYFDESAMRAV
RKASPFPPLPEGTGEEGIEMGIRFHSSELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29177; Mature: 29046

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDRAFGLSREDRGGLRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSS
CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
ADLRMDGGNSSRELAKELADIPEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMK
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHH
RQDGALGKAIEEIRRRVESAGQKQASAPAYPGGGITSDSPIGGSPAGAVGDAELGARMKA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
YYGSIWMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNSYFDESAMRA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
VRKASPFPPLPEGTGEEGIEMGIRFHSSELR
HHHCCCCCCCCCCCCCHHHHHHHEECCCCCC
>Mature Secondary Structure 
TVDRAFGLSREDRGGLRRMLVLSLLLHAFALSLFFVCVPKASSPKLTFGPDYAVSLVSS
CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHC
ADLRMDGGNSSRELAKELADIPEPEPATLPAAPAKPEGKVSRSEPASLSPVPVRKVEPMK
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHH
RQDGALGKAIEEIRRRVESAGQKQASAPAYPGGGITSDSPIGGSPAGAVGDAELGARMKA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
YYGSIWMRIKRHWSMPPDLLPRQNIEAVIHVRILRSGAVEGISFEQRSGNSYFDESAMRA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
VRKASPFPPLPEGTGEEGIEMGIRFHSSELR
HHHCCCCCCCCCCCCCHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA