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The map label for this gene is ydiK [C]

Identifier: 85858614

GI number: 85858614

Start: 784244

End: 785335

Strand: Direct

Name: ydiK [C]

Synonym: SYN_02943

Alternate gene names: 85858614

Gene position: 784244-785335 (Clockwise)

Preceding gene: 85858613

Following gene: 85858616

Centisome position: 24.67

GC content: 57.97

Gene sequence:

>1092_bases
ATGTCGATGCAGAAATCCCCGGCCCCGGACCTGACCAGGATCATACTGCAGATTCTATGGATCGGAATCCTGATTGCTTC
AAGCCTCTGGATACTGAGGCCTTTCCTTCCGTCTCTTATCTGGTCCGTCATGATCGTTGTGGCCACCTGGCCATTCATGC
TGAAGATGGAAACCTGTCTGTGGCGGAAGCGGGGCCTTGCTGTCGCGGCAATGATGATCGCCATGCTGACCCTGTTCGTC
GTACCTTTTTCGCTGGCCATTGTCGCCATCATCGATAATGCGGACAGAATCGCCGCCTGGGTGACATCCTTCCAGGGGCA
GGCTCTGCCGGCACTTCCTGACTGGTTGTCTGGAGTTCCTGTTGTGGGATCAAAGTTAAACACTGCCTGGGAAGGTGTCA
GGACCGGGCCGGAAGGAATAGCGGCACGCCTTGTCCCTTATGCGGGAAAGCTTCTGAGCTGGTTTCTCTCCCAGGCCGGA
AGCGTGGGGATCATCGCGCTGGAATTTCTCCTCACGGTGATCATCGCCGCGATCTTATACGTCAATGGCGAGACGGCCTC
CAAGGGCGTTTTTCAATTCGCACGTCGGCTCGGAGGGCATCGTGGAGAGGATGTCGCCATGCTGGCTGCAAAAACCGTAC
GGGGGGTTGCTCTTGGTGTGGTCGGTACGGCCCTGGTGCAGTCACTCCTCGGCGGCATCGGTCTGTCCGTCGCTGGAGTG
CCGGCCGCTACGGTGCTGACCGGAGTGATGTTCATGCTCTGCATCGCCCAGCTGGGGCCGGGGCTTGTCCTTTTTCCCGC
AGTGATCTGGCTTTACTGGAGCGGTCAGACGACCTGGGGAACGATGTTGCTCGTATGGACGATATTTGCCTGCACCATTG
ACAATCTCCTGCGCCCGATCCTCATCAAAAAAGGCGCCGATCTGCCGATGCTCCTGATCTTTGCCGGTGTCATCGGGGGA
CTTGCCTCCTTTGGCATCGTCGGGCTTTTTATTGGTCCGGTCGTGCTCTCTGTGACCCTCAGACTGCTGGGAGTATGGGT
AGCAGACACAGAAGTGAGTCCAAGCCGGGAAGATGCAGGAGCCGGCCCTTGA

Upstream 100 bases:

>100_bases
TCACTGATGTGACCGAATGGTGGAAGCGTAAGAGTAAAAGTCGAAGAAATCCGGCTTCAGAAACCAAGACTCAGAGATTG
GAAATAAAAGAGGAGGCATC

Downstream 100 bases:

>100_bases
GTTTTCCGTGTTTTATCTGCCATGAACGCTTATTTTCTCTTGAGTTTATAAAAATTTTTCCATACACGTATCACCTGATA
TGATGCAGGTGTCCGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSMQKSPAPDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCLWRKRGLAVAAMMIAMLTLFV
VPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNTAWEGVRTGPEGIAARLVPYAGKLLSWFLSQAG
SVGIIALEFLLTVIIAAILYVNGETASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGV
PAATVLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVWTIFACTIDNLLRPILIKKGADLPMLLIFAGVIGG
LASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDAGAGP

Sequences:

>Translated_363_residues
MSMQKSPAPDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCLWRKRGLAVAAMMIAMLTLFV
VPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNTAWEGVRTGPEGIAARLVPYAGKLLSWFLSQAG
SVGIIALEFLLTVIIAAILYVNGETASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGV
PAATVLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVWTIFACTIDNLLRPILIKKGADLPMLLIFAGVIGG
LASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDAGAGP
>Mature_362_residues
SMQKSPAPDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCLWRKRGLAVAAMMIAMLTLFVV
PFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVPVVGSKLNTAWEGVRTGPEGIAARLVPYAGKLLSWFLSQAGS
VGIIALEFLLTVIIAAILYVNGETASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGVP
AATVLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVWTIFACTIDNLLRPILIKKGADLPMLLIFAGVIGGL
ASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDAGAGP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=350, Percent_Identity=44.8571428571429, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38544; Mature: 38413

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure 
SMQKSPAPDLTRIILQILWIGILIASSLWILRPFLPSLIWSVMIVVATWPFMLKMETCL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRKRGLAVAAMMIAMLTLFVVPFSLAIVAIIDNADRIAAWVTSFQGQALPALPDWLSGVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCC
VVGSKLNTAWEGVRTGPEGIAARLVPYAGKLLSWFLSQAGSVGIIALEFLLTVIIAAILY
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
VNGETASKGVFQFARRLGGHRGEDVAMLAAKTVRGVALGVVGTALVQSLLGGIGLSVAGV
HCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PAATVLTGVMFMLCIAQLGPGLVLFPAVIWLYWSGQTTWGTMLLVWTIFACTIDNLLRPI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LIKKGADLPMLLIFAGVIGGLASFGIVGLFIGPVVLSVTLRLLGVWVADTEVSPSREDAG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AGP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]