Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858613

Identifier: 85858613

GI number: 85858613

Start: 783742

End: 784065

Strand: Direct

Name: 85858613

Synonym: SYN_03431

Alternate gene names: NA

Gene position: 783742-784065 (Clockwise)

Preceding gene: 85858612

Following gene: 85858614

Centisome position: 24.65

GC content: 54.32

Gene sequence:

>324_bases
ATGAATCTCACCATCGAAGTGAGGGCCAAACCGGAAAAGTTTCAGGAGCTTTATCAGACCTTACAGGCGCTCCTTCCCAC
AATGCGCAGGGAAAATGGATGTCTTGAGTCCCGCATCTACCGGGATGTGGAGGATGGCGAGGTTTTTTCCCTTGCGATGC
ACTGGGACGACGTGGAGAAATTTGAAAACTACATGCGCTCGATCAGCGGTAGCGCGCTTCTCGGAGCTGTCGACCTGCTG
AGCAAAGCAGTGAGGGTCAGGATGGGCGGCGATAATCCCTGGGGTGGAATCGAAGTCCTGAAGCGGATGAGGAAGGGAGT
CTGA

Upstream 100 bases:

>100_bases
ATCGCCGTTTCCGTGCATGGCTCGAGGGCCTGTACAGAGTGCAGGGGAATGAACATTGAATTGAGATCCTGCCCTATTTG
AACGCAAAAAGGAGAATTCA

Downstream 100 bases:

>100_bases
GCCGGAACGAGGAATGACCATCCGGCAGATCTCTCTGATAATTGATGCTGAAGTTGTCGACAAAGGGCGGGGACCATTTC
ACTGATGTGACCGAATGGTG

Product: cytoplasmic protein

Products: NA

Alternate protein names: Antibiotic Biosynthesis Monooxygenase

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNLTIEVRAKPEKFQELYQTLQALLPTMRRENGCLESRIYRDVEDGEVFSLAMHWDDVEKFENYMRSISGSALLGAVDLL
SKAVRVRMGGDNPWGGIEVLKRMRKGV

Sequences:

>Translated_107_residues
MNLTIEVRAKPEKFQELYQTLQALLPTMRRENGCLESRIYRDVEDGEVFSLAMHWDDVEKFENYMRSISGSALLGAVDLL
SKAVRVRMGGDNPWGGIEVLKRMRKGV
>Mature_107_residues
MNLTIEVRAKPEKFQELYQTLQALLPTMRRENGCLESRIYRDVEDGEVFSLAMHWDDVEKFENYMRSISGSALLGAVDLL
SKAVRVRMGGDNPWGGIEVLKRMRKGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12262; Mature: 12262

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTIEVRAKPEKFQELYQTLQALLPTMRRENGCLESRIYRDVEDGEVFSLAMHWDDVEK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHH
FENYMRSISGSALLGAVDLLSKAVRVRMGGDNPWGGIEVLKRMRKGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNLTIEVRAKPEKFQELYQTLQALLPTMRRENGCLESRIYRDVEDGEVFSLAMHWDDVEK
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEHHHHHHHHH
FENYMRSISGSALLGAVDLLSKAVRVRMGGDNPWGGIEVLKRMRKGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA