| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858589
Identifier: 85858589
GI number: 85858589
Start: 750381
End: 751727
Strand: Direct
Name: 85858589
Synonym: SYN_03135
Alternate gene names: NA
Gene position: 750381-751727 (Clockwise)
Preceding gene: 85858588
Following gene: 85858590
Centisome position: 23.6
GC content: 50.41
Gene sequence:
>1347_bases GTGGCTGATATGAAAGTACATATTCCAGAAAGGCAACTTCTTATGTTCGAGACGCAGTTTTCGGATGTCCTCAACCCGGA GCATGAGTTACTTCGTGCCGCACGCTTGATCGATTGGGACAACATCCATGATACACTGTCTGCTTACTATAGCCTCCGGG GTCGCCAGGGGAAATCCATTCGACTGATGGTCGGCATACACATTTTGAAACATCGCTATAACTGTTCCGACGAACGAGCG GTTGAAATGCTGCATGAAAACGCCTACTGGCAGTGCTTTTGCGGATTCAACAGCTTTCAGCGTGGACAGATTATGGAAGC CACATCCCTGGTGAAGTTTCGGAATCGAATCGGCACGGAAGGGATGAAAGAGATAGAGGCGGCGTTGCTCAAGACCTGGT CCGAGATGGGCTTGGTAAAAGCCAGACGGGTGGCGGTCGATACCACTGCTCAACCCAAGAACATCGCCTATCCGACGGAC GCCGATCTCCTTTACCGGATTAGAGAGAAGATCGTCAAGCAAGTCCAAAGGGTTCGTGAGGAGGTAACCCTTCGGAAGCC CTTTCGCACCTTCAATCGATCTGGTAAAAAACTCCTCCTCGGAATCAAGAAGTTCCACCGAAAAAATCCGGAAGGCAGGA AAGAGGAGATCAAAAAACTCAAAGAGATGACCCGTCATGTGGTCGAAAAGACCGGAAGGGTGGTAAGCAGTCTTTACCGT CGAGGGCTCAAGGAATCGGGACGGAAACTCAATCGTCTGGTTTCTCTCGGGAAGAAAATCGTCAATCAAACGGAGGAGGT TCTCTCCGGCCACCTTCCTCGAAAGCGGATTTACTCCCTTCATGAGCCGAATGTGGCCGTGATCAGGAAAGGAAAGAGCC ACCCCGACACTGAGTTTGGAGCACTTATTGCTCTTGCAAAAAACGATGACGGTTTGATCCTGTCCCATGTGGAATATCAG CATAACGTCGCCGATGTGAAGACCTTGGGACGGGTGATCACCGGAATCAAGACCAATGTGGGACAACGACCACGAGAAGT TGCGGCGGATCGGGGATTCGATCAATCCCTCAAAAAACAGGAAAACTGCCGCAGACGGTGGGGCATCAAAAGAATCGCCA TTCCAAAGAAGGGAAAGACGCCTCATCCGGACAGCAAAGAATCCTGGTTCAGAAAAGCCTTGAAGCAAAGAGTCAAGATT GAACCCGTTATCGGTCATCTCAAAAGCGATCATCGCATGAATCGCTGTCGGTACAAGGGAGCGGCAGGAGATACCGTCAA TGTTGTATGGGCCACCCTCGCCTGGAACATGAAAAAGATTGTCCAACTGCATGGGCAAATGGGATAA
Upstream 100 bases:
>100_bases AAAATACGGGCTGCAACCCGCATAAATAATGAAACTGTTCTTTGAAAACTGAAGAAAATTGTGGATTTGCAGTTGTTTCT ACTCTGAAAATGTACTATAA
Downstream 100 bases:
>100_bases AAGCAAGCCTTAGAGGGAATCGACAGACAGTGTAGAGAAAATCATTCAGAAAATCTCTTCTTTAGCCGCAATCATCTTCA GTTTTCAAAGAATCGATCAA
Product: transposase
Products: NA
Alternate protein names: ORFA [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MADMKVHIPERQLLMFETQFSDVLNPEHELLRAARLIDWDNIHDTLSAYYSLRGRQGKSIRLMVGIHILKHRYNCSDERA VEMLHENAYWQCFCGFNSFQRGQIMEATSLVKFRNRIGTEGMKEIEAALLKTWSEMGLVKARRVAVDTTAQPKNIAYPTD ADLLYRIREKIVKQVQRVREEVTLRKPFRTFNRSGKKLLLGIKKFHRKNPEGRKEEIKKLKEMTRHVVEKTGRVVSSLYR RGLKESGRKLNRLVSLGKKIVNQTEEVLSGHLPRKRIYSLHEPNVAVIRKGKSHPDTEFGALIALAKNDDGLILSHVEYQ HNVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQENCRRRWGIKRIAIPKKGKTPHPDSKESWFRKALKQRVKI EPVIGHLKSDHRMNRCRYKGAAGDTVNVVWATLAWNMKKIVQLHGQMG
Sequences:
>Translated_448_residues MADMKVHIPERQLLMFETQFSDVLNPEHELLRAARLIDWDNIHDTLSAYYSLRGRQGKSIRLMVGIHILKHRYNCSDERA VEMLHENAYWQCFCGFNSFQRGQIMEATSLVKFRNRIGTEGMKEIEAALLKTWSEMGLVKARRVAVDTTAQPKNIAYPTD ADLLYRIREKIVKQVQRVREEVTLRKPFRTFNRSGKKLLLGIKKFHRKNPEGRKEEIKKLKEMTRHVVEKTGRVVSSLYR RGLKESGRKLNRLVSLGKKIVNQTEEVLSGHLPRKRIYSLHEPNVAVIRKGKSHPDTEFGALIALAKNDDGLILSHVEYQ HNVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQENCRRRWGIKRIAIPKKGKTPHPDSKESWFRKALKQRVKI EPVIGHLKSDHRMNRCRYKGAAGDTVNVVWATLAWNMKKIVQLHGQMG >Mature_447_residues ADMKVHIPERQLLMFETQFSDVLNPEHELLRAARLIDWDNIHDTLSAYYSLRGRQGKSIRLMVGIHILKHRYNCSDERAV EMLHENAYWQCFCGFNSFQRGQIMEATSLVKFRNRIGTEGMKEIEAALLKTWSEMGLVKARRVAVDTTAQPKNIAYPTDA DLLYRIREKIVKQVQRVREEVTLRKPFRTFNRSGKKLLLGIKKFHRKNPEGRKEEIKKLKEMTRHVVEKTGRVVSSLYRR GLKESGRKLNRLVSLGKKIVNQTEEVLSGHLPRKRIYSLHEPNVAVIRKGKSHPDTEFGALIALAKNDDGLILSHVEYQH NVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQENCRRRWGIKRIAIPKKGKTPHPDSKESWFRKALKQRVKIE PVIGHLKSDHRMNRCRYKGAAGDTVNVVWATLAWNMKKIVQLHGQMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008490 [H]
Pfam domain/function: PF05598 DUF772 [H]
EC number: NA
Molecular weight: Translated: 51767; Mature: 51636
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMKVHIPERQLLMFETQFSDVLNPEHELLRAARLIDWDNIHDTLSAYYSLRGRQGKSI CCCCEEECCCHHHHEEHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE RLMVGIHILKHRYNCSDERAVEMLHENAYWQCFCGFNSFQRGQIMEATSLVKFRNRIGTE EEHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC GMKEIEAALLKTWSEMGLVKARRVAVDTTAQPKNIAYPTDADLLYRIREKIVKQVQRVRE HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EVTLRKPFRTFNRSGKKLLLGIKKFHRKNPEGRKEEIKKLKEMTRHVVEKTGRVVSSLYR HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLKESGRKLNRLVSLGKKIVNQTEEVLSGHLPRKRIYSLHEPNVAVIRKGKSHPDTEFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCC ALIALAKNDDGLILSHVEYQHNVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQ EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH ENCRRRWGIKRIAIPKKGKTPHPDSKESWFRKALKQRVKIEPVIGHLKSDHRMNRCRYKG HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC AAGDTVNVVWATLAWNMKKIVQLHGQMG CCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADMKVHIPERQLLMFETQFSDVLNPEHELLRAARLIDWDNIHDTLSAYYSLRGRQGKSI CCCEEECCCHHHHEEHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE RLMVGIHILKHRYNCSDERAVEMLHENAYWQCFCGFNSFQRGQIMEATSLVKFRNRIGTE EEHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC GMKEIEAALLKTWSEMGLVKARRVAVDTTAQPKNIAYPTDADLLYRIREKIVKQVQRVRE HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EVTLRKPFRTFNRSGKKLLLGIKKFHRKNPEGRKEEIKKLKEMTRHVVEKTGRVVSSLYR HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLKESGRKLNRLVSLGKKIVNQTEEVLSGHLPRKRIYSLHEPNVAVIRKGKSHPDTEFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCCC ALIALAKNDDGLILSHVEYQHNVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQ EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH ENCRRRWGIKRIAIPKKGKTPHPDSKESWFRKALKQRVKIEPVIGHLKSDHRMNRCRYKG HHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCC AAGDTVNVVWATLAWNMKKIVQLHGQMG CCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8429568 [H]