| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858588
Identifier: 85858588
GI number: 85858588
Start: 749622
End: 750230
Strand: Direct
Name: 85858588
Synonym: SYN_02970
Alternate gene names: NA
Gene position: 749622-750230 (Clockwise)
Preceding gene: 85858587
Following gene: 85858589
Centisome position: 23.58
GC content: 42.04
Gene sequence:
>609_bases ATGAAAATATTAATGCATGTCTGCTGTGCGCCCTGCACGATTTATCCTTTAAAGTTTCTGAGGGACTGCAACCATGATGT TCATGGGTTTTTCTTCAATCCAAACATCCATCCTTATCTTGAGTATTGTCGACGCCGAGACGCCTTGCGGGCATATGCGG AGGAGGAAAATCTACCGATCATATGGAAGGATAATTACGACTTGGAGCAATTTTTGAGGACTGTCGTATTTCGTGAAAGT GATCGTTGCCGTTTCTGTTATTACAGTAGAATGAGTTATGCGGTGCATATCGCAAAAAAAGGCAAATACGATGGATTTAC TTCTACGCTTTTGTACAGCAAATATCAGAATCATGAATTGATTCGTAGTATTGGTGAAAACCTGGCAAAGGAAAACGGGG TAAGCTTTATCTATCACGACTTTCGAGAAGGATGGGAAAGTGGAATTCGTATCTCAAAATCCCGTGGTATATATCGACAG CAATATTGCGGGTGTATCTATAGTGAGAAAGATCGATATTATAAACAAGCACCCCGTCAAGTAGTCCGGGAATCCAAAAC GGAATCCGGAGGGTTCAAACAGGGCGTAGCTGACGAGTCAAATGGATGA
Upstream 100 bases:
>100_bases ACGCGGCAGGATAGCCACAAAAAAAGCGTACGAACATTTCGGGAAAAGAAAATTCGAAGTTGGACAAAAGGAATTATTTT AATTTCAGTAATCTCTGTTT
Downstream 100 bases:
>100_bases TAAAAAGCTTTAGAGAATAAAAACATAGGATGCTAAATAGTCCGTCCTGAAAAATACGGGCTGCAACCCGCATAAATAAT GAAACTGTTCTTTGAAAACT
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG
Sequences:
>Translated_202_residues MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG >Mature_202_residues MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 23964; Mature: 23964
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPI CHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE IWKDNYDLEQFLRTVVFRESDRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHEL EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHH IRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQQYCGCIYSEKDRYYKQAPRQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH VVRESKTESGGFKQGVADESNG HHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPI CHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE IWKDNYDLEQFLRTVVFRESDRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHEL EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHH IRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQQYCGCIYSEKDRYYKQAPRQ HHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH VVRESKTESGGFKQGVADESNG HHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]