Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858588

Identifier: 85858588

GI number: 85858588

Start: 749622

End: 750230

Strand: Direct

Name: 85858588

Synonym: SYN_02970

Alternate gene names: NA

Gene position: 749622-750230 (Clockwise)

Preceding gene: 85858587

Following gene: 85858589

Centisome position: 23.58

GC content: 42.04

Gene sequence:

>609_bases
ATGAAAATATTAATGCATGTCTGCTGTGCGCCCTGCACGATTTATCCTTTAAAGTTTCTGAGGGACTGCAACCATGATGT
TCATGGGTTTTTCTTCAATCCAAACATCCATCCTTATCTTGAGTATTGTCGACGCCGAGACGCCTTGCGGGCATATGCGG
AGGAGGAAAATCTACCGATCATATGGAAGGATAATTACGACTTGGAGCAATTTTTGAGGACTGTCGTATTTCGTGAAAGT
GATCGTTGCCGTTTCTGTTATTACAGTAGAATGAGTTATGCGGTGCATATCGCAAAAAAAGGCAAATACGATGGATTTAC
TTCTACGCTTTTGTACAGCAAATATCAGAATCATGAATTGATTCGTAGTATTGGTGAAAACCTGGCAAAGGAAAACGGGG
TAAGCTTTATCTATCACGACTTTCGAGAAGGATGGGAAAGTGGAATTCGTATCTCAAAATCCCGTGGTATATATCGACAG
CAATATTGCGGGTGTATCTATAGTGAGAAAGATCGATATTATAAACAAGCACCCCGTCAAGTAGTCCGGGAATCCAAAAC
GGAATCCGGAGGGTTCAAACAGGGCGTAGCTGACGAGTCAAATGGATGA

Upstream 100 bases:

>100_bases
ACGCGGCAGGATAGCCACAAAAAAAGCGTACGAACATTTCGGGAAAAGAAAATTCGAAGTTGGACAAAAGGAATTATTTT
AATTTCAGTAATCTCTGTTT

Downstream 100 bases:

>100_bases
TAAAAAGCTTTAGAGAATAAAAACATAGGATGCTAAATAGTCCGTCCTGAAAAATACGGGCTGCAACCCGCATAAATAAT
GAAACTGTTCTTTGAAAACT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES
DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ
QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG

Sequences:

>Translated_202_residues
MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES
DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ
QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG
>Mature_202_residues
MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPIIWKDNYDLEQFLRTVVFRES
DRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHELIRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQ
QYCGCIYSEKDRYYKQAPRQVVRESKTESGGFKQGVADESNG

Specific function: Unknown

COG id: COG1636

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003828 [H]

Pfam domain/function: PF02677 DUF208 [H]

EC number: NA

Molecular weight: Translated: 23964; Mature: 23964

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPI
CHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE
IWKDNYDLEQFLRTVVFRESDRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHEL
EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHH
IRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQQYCGCIYSEKDRYYKQAPRQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
VVRESKTESGGFKQGVADESNG
HHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKILMHVCCAPCTIYPLKFLRDCNHDVHGFFFNPNIHPYLEYCRRRDALRAYAEEENLPI
CHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCE
IWKDNYDLEQFLRTVVFRESDRCRFCYYSRMSYAVHIAKKGKYDGFTSTLLYSKYQNHEL
EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHEEEEECCCCCCCHHHHHHHHHHCCHHH
IRSIGENLAKENGVSFIYHDFREGWESGIRISKSRGIYRQQYCGCIYSEKDRYYKQAPRQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
VVRESKTESGGFKQGVADESNG
HHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]