| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858560
Identifier: 85858560
GI number: 85858560
Start: 719026
End: 720060
Strand: Direct
Name: 85858560
Synonym: SYN_02449
Alternate gene names: NA
Gene position: 719026-720060 (Clockwise)
Preceding gene: 85858559
Following gene: 85858570
Centisome position: 22.62
GC content: 52.17
Gene sequence:
>1035_bases ATGATTATTTCGTGCATTAAGTGTTTTACAAAGTACCGGTTTGATGATTCCCTGATGGAGGGCAATGGCGTCTGGGTTCG CTGCAGCCGCTGCCGGAAATTGTTTTTTCAGGAGAATCCCGCCAAAAAGGAGCTCAGGGAAGCCTCCGTCGTCGCGGCGG ACATGGATGTCTTATCCCCGGAACCGGGCAGGGATTCGGATTTCCCCGATTTTGACAAGAAGCTTGACGCAGGCACAAGC AGGGAAGAAATCGATGTGTTTCTGGCTAAAATTGAAGAGACTAAGAAAACACTGGAAGAGAATGATGACACTGAGACTTT GGTCCGTATTGGAAAAGAAGTGAGGAAAGAAGCGGAGCCGGAGACCGGCGGGATTGGAAGCGTGGCGAAGCCGACCGGTG CGGTATATGAGCAGTCTGAGCCGGGAACATCGGAATTTGCAGGGCCCTCGGTTAAAACGGAAAAGCGGGGATTCTGGTCA CCCTGGCGGATTCTGGCCTTGATTCTTTTCATCAATCTTCTTTTCGGCGGCATCTATCTGTGGTTTTTCCCGGGGACGAG TGGCCGGTTTGTTCGTGACCTGTCCACCACAGTTCCCTATGTGGGTGGCCTGCTTGGTTCCGGAGAAAAATCCGGGGATT TTCATTTGAATCAGATTCGGCTGGAAGATGTGCGGCAGCGACATGTCAGCAACCTGATGGCGGGGAAATTGCGGGTCATT GAAGGGGTTGCAGTAAATTCGTCTCCCTGGCCGATTACACGAATGCAGGTCAAGGGAGAGCTTTATGACAGCAACGGCGC AATGATTGCCGACCGGTTCGCTTATGCCGGCAATCTTCTCAGTGATGATGAACTGGCGACCCTGTCGGAGGAAGCCCTGC AGAAGGAGCTCGATCTTCCGATGGGCAGTGATGCCCAGAATATCCGGATTGAACCGAAAGGGCAGATTCCCTTTATGATT ATCTTTGCCCATGAACCTCCGGATATCGTGAAGGCTATGGTTTCACCGGCGGGGGGAGAGAAGTTGCTTCAATAA
Upstream 100 bases:
>100_bases CTATGGTCTTGATTTTGATGAAAAAGGCCGTTTTCTTCCCGATGTATATATTGTTGAATGACTTCCTCGGACTGGTTCGT GATTCCCTGTTGGAGAAACT
Downstream 100 bases:
>100_bases TAAAGAAAATACAGGACGTTGACAAAAGAGAGGCAGGGATCTTCAATTTTCCCTGCCTCTCTTTTGTTGGAAGTTGTCAG CGGAATTATGCTGTTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MIISCIKCFTKYRFDDSLMEGNGVWVRCSRCRKLFFQENPAKKELREASVVAADMDVLSPEPGRDSDFPDFDKKLDAGTS REEIDVFLAKIEETKKTLEENDDTETLVRIGKEVRKEAEPETGGIGSVAKPTGAVYEQSEPGTSEFAGPSVKTEKRGFWS PWRILALILFINLLFGGIYLWFFPGTSGRFVRDLSTTVPYVGGLLGSGEKSGDFHLNQIRLEDVRQRHVSNLMAGKLRVI EGVAVNSSPWPITRMQVKGELYDSNGAMIADRFAYAGNLLSDDELATLSEEALQKELDLPMGSDAQNIRIEPKGQIPFMI IFAHEPPDIVKAMVSPAGGEKLLQ
Sequences:
>Translated_344_residues MIISCIKCFTKYRFDDSLMEGNGVWVRCSRCRKLFFQENPAKKELREASVVAADMDVLSPEPGRDSDFPDFDKKLDAGTS REEIDVFLAKIEETKKTLEENDDTETLVRIGKEVRKEAEPETGGIGSVAKPTGAVYEQSEPGTSEFAGPSVKTEKRGFWS PWRILALILFINLLFGGIYLWFFPGTSGRFVRDLSTTVPYVGGLLGSGEKSGDFHLNQIRLEDVRQRHVSNLMAGKLRVI EGVAVNSSPWPITRMQVKGELYDSNGAMIADRFAYAGNLLSDDELATLSEEALQKELDLPMGSDAQNIRIEPKGQIPFMI IFAHEPPDIVKAMVSPAGGEKLLQ >Mature_344_residues MIISCIKCFTKYRFDDSLMEGNGVWVRCSRCRKLFFQENPAKKELREASVVAADMDVLSPEPGRDSDFPDFDKKLDAGTS REEIDVFLAKIEETKKTLEENDDTETLVRIGKEVRKEAEPETGGIGSVAKPTGAVYEQSEPGTSEFAGPSVKTEKRGFWS PWRILALILFINLLFGGIYLWFFPGTSGRFVRDLSTTVPYVGGLLGSGEKSGDFHLNQIRLEDVRQRHVSNLMAGKLRVI EGVAVNSSPWPITRMQVKGELYDSNGAMIADRFAYAGNLLSDDELATLSEEALQKELDLPMGSDAQNIRIEPKGQIPFMI IFAHEPPDIVKAMVSPAGGEKLLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38218; Mature: 38218
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISCIKCFTKYRFDDSLMEGNGVWVRCSRCRKLFFQENPAKKELREASVVAADMDVLSP CHHHHHHHHHHHCCCCHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC EPGRDSDFPDFDKKLDAGTSREEIDVFLAKIEETKKTLEENDDTETLVRIGKEVRKEAEP CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGGIGSVAKPTGAVYEQSEPGTSEFAGPSVKTEKRGFWSPWRILALILFINLLFGGIYL CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE WFFPGTSGRFVRDLSTTVPYVGGLLGSGEKSGDFHLNQIRLEDVRQRHVSNLMAGKLRVI EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEE EGVAVNSSPWPITRMQVKGELYDSNGAMIADRFAYAGNLLSDDELATLSEEALQKELDLP EEEEECCCCCCEEEEEEEEEEECCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC MGSDAQNIRIEPKGQIPFMIIFAHEPPDIVKAMVSPAGGEKLLQ CCCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHCC >Mature Secondary Structure MIISCIKCFTKYRFDDSLMEGNGVWVRCSRCRKLFFQENPAKKELREASVVAADMDVLSP CHHHHHHHHHHHCCCCHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC EPGRDSDFPDFDKKLDAGTSREEIDVFLAKIEETKKTLEENDDTETLVRIGKEVRKEAEP CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC ETGGIGSVAKPTGAVYEQSEPGTSEFAGPSVKTEKRGFWSPWRILALILFINLLFGGIYL CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE WFFPGTSGRFVRDLSTTVPYVGGLLGSGEKSGDFHLNQIRLEDVRQRHVSNLMAGKLRVI EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEE EGVAVNSSPWPITRMQVKGELYDSNGAMIADRFAYAGNLLSDDELATLSEEALQKELDLP EEEEECCCCCCEEEEEEEEEEECCCCCEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC MGSDAQNIRIEPKGQIPFMIIFAHEPPDIVKAMVSPAGGEKLLQ CCCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA