Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858521

Identifier: 85858521

GI number: 85858521

Start: 674057

End: 674254

Strand: Direct

Name: 85858521

Synonym: SYN_03409

Alternate gene names: NA

Gene position: 674057-674254 (Clockwise)

Preceding gene: 85858520

Following gene: 85858522

Centisome position: 21.2

GC content: 41.92

Gene sequence:

>198_bases
TTGCAAAAGAATTCCTTCAGAATACATAAAAAAAACAGGCTGAAAGGGGCAAACCGATTTCCAGGTGATCGGCCTTATTC
CAATTCCATATCACAGCGCATTCTTTGCCGGCTTTGCTATCGTTTCCGTGATGTTTTTCTGATGTCCGCCAGTTCTTCTA
TTCTTGCCGTCTTGATATCATCGCTGATCTGGAATTAA

Upstream 100 bases:

>100_bases
CGGTCGGCACGTCCCTCCGATATTGTTCTCATTGCGGGAAAAGGACATGAAGACTATCAGATCATTGGAGAGAAGCGTCT
TTTCTTTGATGACCGCGCAG

Downstream 100 bases:

>100_bases
AAGAATTGCCTGCTTGGGCATGTAAAGTCTTCAAAAAGCCAAAGAGAAAAATCGTCGATCCGGGGCGGGGAGGTTTTTTT
GGACCATAATTCAACACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MQKNSFRIHKKNRLKGANRFPGDRPYSNSISQRILCRLCYRFRDVFLMSASSSILAVLISSLIWN

Sequences:

>Translated_65_residues
MQKNSFRIHKKNRLKGANRFPGDRPYSNSISQRILCRLCYRFRDVFLMSASSSILAVLISSLIWN
>Mature_65_residues
MQKNSFRIHKKNRLKGANRFPGDRPYSNSISQRILCRLCYRFRDVFLMSASSSILAVLISSLIWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7606; Mature: 7606

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNSFRIHKKNRLKGANRFPGDRPYSNSISQRILCRLCYRFRDVFLMSASSSILAVLIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SLIWN
HHHCC
>Mature Secondary Structure
MQKNSFRIHKKNRLKGANRFPGDRPYSNSISQRILCRLCYRFRDVFLMSASSSILAVLIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SLIWN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA