Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yecE [C]

Identifier: 85858511

GI number: 85858511

Start: 664717

End: 665460

Strand: Direct

Name: yecE [C]

Synonym: SYN_01732

Alternate gene names: 85858511

Gene position: 664717-665460 (Clockwise)

Preceding gene: 85858509

Following gene: 85858514

Centisome position: 20.91

GC content: 50.0

Gene sequence:

>744_bases
ATGGGAAAAAGTTCATTGTTTCCGTCTGTGCGCATTGGGACTTCCGGCTGGATTTATCCCCATTGGCAGGGTCGCTTTTA
CCCTCTGGAGTGTCCCAAAGCAAAATGGTTGGAATACTATGCCCGTCATTTTGACGTTCTGGAGCTGAATGTCAGCTTCT
ATCGACTGCCTGATGCGGAGACCTTCCGGAGGTGGAGTGCGCGAACGCCGGCAGGATTTATCTGGACCGTCAAAATGAAT
CATTATATCACACACATCCTGCGGTTAAAAAATGTGGAAGAGGCGATGTCCCGTTTTTATGATGCAGTTTCGTCCCTTGG
CGATAAATTGGGCCCGATTGTCATTCAGCTTCCACCGAGTCTCATTTACGAAAATTCGCTGGTCCGTCATTTTCTTGGTC
TTCTTGATCTCTCGCGGAAACATGCCATTGAAGTCCGCCATGGTTCCTGGATGCAGGATGAGTTTATGGAACTTCTCCGA
CAGCACAATGTGGCCTTCTGCATTTCCGATACCGCGGGGCGCTATCCGATGCGAACAGCCGTGACTGCGGATTATGTCTA
TCTCCGGCTTCATGGATCACGGAGATTGTATGCGTCCTTATATACGGAAGAAGAATTACGGGGATGGGCTGAGATGATAC
GGGGCTGGTCCCGCGAGACCTGGGTTTTCTTCGATAATGACTTTGAAGGCAATGCGGTTCGGAATGCAATACGGTTGCGC
GAAATCTGCAGCGGAGGTTCATGA

Upstream 100 bases:

>100_bases
ATAACTTCCCGGCGACGGAAGGCAACCCTATGGGAAAGTCCTGATTCCGTCAAGGAATTTTCAGCGCGATGACTGCGGTT
TTTTGAGGCATTGATCAGGA

Downstream 100 bases:

>100_bases
TGATCAAACAATCAGAATGGACCCGGAGCAGTTGCCCCTGTCCGTTTGTATTCAAAATGGTGACAATGAGAAACGAGCTA
AGATCACAGGTATGAGGATA

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMN
HYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLR
QHNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR
EICSGGS

Sequences:

>Translated_247_residues
MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMN
HYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLR
QHNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR
EICSGGS
>Mature_246_residues
GKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMNH
YITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQ
HNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLRE
ICSGGS

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788175, Length=139, Percent_Identity=30.2158273381295, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28983; Mature: 28851

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAE
CCCCCCCCEEEECCCCCEEECCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEEECCCHH
TFRRWSARTPAGFIWTVKMNHYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPS
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCHH
LIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQHNVAFCISDTAGRYPMRTA
HHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEE
VTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR
EEEEEEEEEEECCCEEEHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
EICSGGS
HHHCCCC
>Mature Secondary Structure 
GKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAE
CCCCCCCEEEECCCCCEEECCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEEECCCHH
TFRRWSARTPAGFIWTVKMNHYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPS
HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCHH
LIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQHNVAFCISDTAGRYPMRTA
HHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEE
VTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR
EEEEEEEEEEECCCEEEHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
EICSGGS
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA