| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yecE [C]
Identifier: 85858511
GI number: 85858511
Start: 664717
End: 665460
Strand: Direct
Name: yecE [C]
Synonym: SYN_01732
Alternate gene names: 85858511
Gene position: 664717-665460 (Clockwise)
Preceding gene: 85858509
Following gene: 85858514
Centisome position: 20.91
GC content: 50.0
Gene sequence:
>744_bases ATGGGAAAAAGTTCATTGTTTCCGTCTGTGCGCATTGGGACTTCCGGCTGGATTTATCCCCATTGGCAGGGTCGCTTTTA CCCTCTGGAGTGTCCCAAAGCAAAATGGTTGGAATACTATGCCCGTCATTTTGACGTTCTGGAGCTGAATGTCAGCTTCT ATCGACTGCCTGATGCGGAGACCTTCCGGAGGTGGAGTGCGCGAACGCCGGCAGGATTTATCTGGACCGTCAAAATGAAT CATTATATCACACACATCCTGCGGTTAAAAAATGTGGAAGAGGCGATGTCCCGTTTTTATGATGCAGTTTCGTCCCTTGG CGATAAATTGGGCCCGATTGTCATTCAGCTTCCACCGAGTCTCATTTACGAAAATTCGCTGGTCCGTCATTTTCTTGGTC TTCTTGATCTCTCGCGGAAACATGCCATTGAAGTCCGCCATGGTTCCTGGATGCAGGATGAGTTTATGGAACTTCTCCGA CAGCACAATGTGGCCTTCTGCATTTCCGATACCGCGGGGCGCTATCCGATGCGAACAGCCGTGACTGCGGATTATGTCTA TCTCCGGCTTCATGGATCACGGAGATTGTATGCGTCCTTATATACGGAAGAAGAATTACGGGGATGGGCTGAGATGATAC GGGGCTGGTCCCGCGAGACCTGGGTTTTCTTCGATAATGACTTTGAAGGCAATGCGGTTCGGAATGCAATACGGTTGCGC GAAATCTGCAGCGGAGGTTCATGA
Upstream 100 bases:
>100_bases ATAACTTCCCGGCGACGGAAGGCAACCCTATGGGAAAGTCCTGATTCCGTCAAGGAATTTTCAGCGCGATGACTGCGGTT TTTTGAGGCATTGATCAGGA
Downstream 100 bases:
>100_bases TGATCAAACAATCAGAATGGACCCGGAGCAGTTGCCCCTGTCCGTTTGTATTCAAAATGGTGACAATGAGAAACGAGCTA AGATCACAGGTATGAGGATA
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMN HYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLR QHNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR EICSGGS
Sequences:
>Translated_247_residues MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMN HYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLR QHNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR EICSGGS >Mature_246_residues GKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAETFRRWSARTPAGFIWTVKMNH YITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPSLIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQ HNVAFCISDTAGRYPMRTAVTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLRE ICSGGS
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788175, Length=139, Percent_Identity=30.2158273381295, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28983; Mature: 28851
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAE CCCCCCCCEEEECCCCCEEECCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEEECCCHH TFRRWSARTPAGFIWTVKMNHYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPS HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCHH LIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQHNVAFCISDTAGRYPMRTA HHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEE VTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR EEEEEEEEEEECCCEEEHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH EICSGGS HHHCCCC >Mature Secondary Structure GKSSLFPSVRIGTSGWIYPHWQGRFYPLECPKAKWLEYYARHFDVLELNVSFYRLPDAE CCCCCCCEEEECCCCCEEECCCCEEEECCCCHHHHHHHHHHHCEEEEEEEEEEECCCHH TFRRWSARTPAGFIWTVKMNHYITHILRLKNVEEAMSRFYDAVSSLGDKLGPIVIQLPPS HHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCHH LIYENSLVRHFLGLLDLSRKHAIEVRHGSWMQDEFMELLRQHNVAFCISDTAGRYPMRTA HHHHHHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEE VTADYVYLRLHGSRRLYASLYTEEELRGWAEMIRGWSRETWVFFDNDFEGNAVRNAIRLR EEEEEEEEEEECCCEEEHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH EICSGGS HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA