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The map label for this gene is atpF1

Identifier: 85858473

GI number: 85858473

Start: 629480

End: 630088

Strand: Direct

Name: atpF1

Synonym: SYN_00548

Alternate gene names: 85858473

Gene position: 629480-630088 (Clockwise)

Preceding gene: 85858472

Following gene: 85858474

Centisome position: 19.8

GC content: 48.44

Gene sequence:

>609_bases
ATGAAAAAGTCTGTGTGGCATCACTCCCTGAAAGGATATTGTGGACGCATTGCGGCTGTCCTCTGTTTCTCGGTTCTGGT
GCCGTTGGTCGCGATGGCGGCCGAAGGTGGAGGGCACGGAGAGGAAGGTACGGACTGGGTTAACTTTGGATGGCGAGTTC
TCGATTTCATTATCTTGGTCGGCCTTTTTTACTGGCTGCTCGCAAGTAAGGTTAAAAGCTTTTTCAGTGGCAGGCGGGAA
GAGATCAAGACGACTCTAGAAGAGGCTCGCTTGGCAAAAGAGGCGGCTGAACACAAGTTTAAGGAATATTCCGAAAAGCT
GGACAAGGCTTCGAAAGAGATTGAGGGCGTTTATGAAATGATCAGGGCTCAGGGGCAGGCTGAAAAGGAGAAAATCCTTG
AGGATGCTCGAAAGGCTGCTGCCAAGATGAAGGAAGATACCCAGGCAAGGATTGAACAGGAACTCAAGAAAGCGAGTCAG
CAGCTGAGGATGGAAGCTGTCCAGTTGTCCGTCCATGTGGCTGAAGATATTTTAAAGAGGAATATAACCCCGGAAGATCA
TCAGAGTATGGTTAAAGATTACTTGGATAAGGTGGTGAGAAAACATTGA

Upstream 100 bases:

>100_bases
AAGTCGCCAAAGACGTCGCTGAAGCGAAGCGCGTGCTGCATGAGCAGTCGGAAAAGTTGGCAATGGAGATTGCTGAAAAA
GTGATGGGAAGGAGTATCCG

Downstream 100 bases:

>100_bases
TCAACAGCGGTATTGCAAAGCGGTATGCCAGAGCGTTCTTTGATATTGCCGGCGAAGACAAACTCTACGAAAAGTATTAT
GAAGAGTTGAGTGGATTCGC

Product: ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 1; ATPase subunit I 1; F-type ATPase subunit b 1; F-ATPase subunit b 1

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKSVWHHSLKGYCGRIAAVLCFSVLVPLVAMAAEGGGHGEEGTDWVNFGWRVLDFIILVGLFYWLLASKVKSFFSGRRE
EIKTTLEEARLAKEAAEHKFKEYSEKLDKASKEIEGVYEMIRAQGQAEKEKILEDARKAAAKMKEDTQARIEQELKKASQ
QLRMEAVQLSVHVAEDILKRNITPEDHQSMVKDYLDKVVRKH

Sequences:

>Translated_202_residues
MKKSVWHHSLKGYCGRIAAVLCFSVLVPLVAMAAEGGGHGEEGTDWVNFGWRVLDFIILVGLFYWLLASKVKSFFSGRRE
EIKTTLEEARLAKEAAEHKFKEYSEKLDKASKEIEGVYEMIRAQGQAEKEKILEDARKAAAKMKEDTQARIEQELKKASQ
QLRMEAVQLSVHVAEDILKRNITPEDHQSMVKDYLDKVVRKH
>Mature_202_residues
MKKSVWHHSLKGYCGRIAAVLCFSVLVPLVAMAAEGGGHGEEGTDWVNFGWRVLDFIILVGLFYWLLASKVKSFFSGRRE
EIKTTLEEARLAKEAAEHKFKEYSEKLDKASKEIEGVYEMIRAQGQAEKEKILEDARKAAAKMKEDTQARIEQELKKASQ
QLRMEAVQLSVHVAEDILKRNITPEDHQSMVKDYLDKVVRKH

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF1_SYNAS (Q2LQZ9)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460675.1
- STRING:   Q2LQZ9
- GeneID:   3884820
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00548
- NMPDR:   fig|56780.10.peg.622
- eggNOG:   NOG87654
- HOGENOM:   HBG617328
- OMA:   WALKKAN
- BioCyc:   SACI56780:SYN_00548-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 23077; Mature: 23077

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12389fa8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVWHHSLKGYCGRIAAVLCFSVLVPLVAMAAEGGGHGEEGTDWVNFGWRVLDFIILV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GLFYWLLASKVKSFFSGRREEIKTTLEEARLAKEAAEHKFKEYSEKLDKASKEIEGVYEM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAQGQAEKEKILEDARKAAAKMKEDTQARIEQELKKASQQLRMEAVQLSVHVAEDILKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NITPEDHQSMVKDYLDKVVRKH
CCCCHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKKSVWHHSLKGYCGRIAAVLCFSVLVPLVAMAAEGGGHGEEGTDWVNFGWRVLDFIILV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GLFYWLLASKVKSFFSGRREEIKTTLEEARLAKEAAEHKFKEYSEKLDKASKEIEGVYEM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAQGQAEKEKILEDARKAAAKMKEDTQARIEQELKKASQQLRMEAVQLSVHVAEDILKR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NITPEDHQSMVKDYLDKVVRKH
CCCCHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA