Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858378

Identifier: 85858378

GI number: 85858378

Start: 536807

End: 537721

Strand: Direct

Name: 85858378

Synonym: SYN_02313

Alternate gene names: NA

Gene position: 536807-537721 (Clockwise)

Preceding gene: 85858377

Following gene: 85858379

Centisome position: 16.88

GC content: 61.97

Gene sequence:

>915_bases
TTGGATCGAATGGTCCGAGTTGCCGGGATACCGCGAGGTCCTGGGCGCTACCGTAGGTGCGTAGGAACAACTCGGGCTTT
TTTGCGCCCCAACCCTAAAACTTACGGAGGAAGAACCATGAGCAACAAGCACAGCATCGCCCCCGAGCACCCCAGCCATC
CGTCTTTTGATTCCCTCAACGAACTCTGCCGTCCCCTCTTCGGCGGCAACGCCTTCGGCGATCCGCGGGAGGAGCAGGCC
GTCCATCTCCTGCCTGGCCGGGAACCCTTCATGCTGGACCGGCAGGTCGCCGCCGTCTACGGCGTTCCGACAAGGCGGTT
GATGGAGCAGGTCCGGCGGAACGCCCAGCACTTCGATTCCGACATGCTCTTCCAGCTCACCGCGGAAGAGCTGAAAAGCC
TCCGGTCGCAAAATGCGACCGCCCCCGTCAACCAGTATCTGCCCTACGGCTTCACCCAAATCGGGGCGAACCATGTGGCC
TTCTTCCTCAAGTCCGAACAGGCCCTGGAGCGTTCCAAGAAAATCAGCCGGTACTTCGTCGCCTTCGAGAACCTCCTGCG
CTCCGCAAAAGGACGGTCGGAGCTGGGGAAACTGGCCCGGTCGCAACCGGAGACCGCCCCGCAAACCGGCGCCGTTCCTG
ACGGCAAGACGCTGATGGACACGGACCGGGTGATCGAAATGTATGAGCTCATCATTGCCATGCAGAAGGAGAAGATCGAG
CATCTGAAGTCGGGGGCCGGTTCCCGCAAGGCGGTCAGCCTGGAAGAGGTGCGGCGCATCCTGAAGCTGGCTGCCGCCGG
TTACGGTTACGCGGACATCGCCAAGGCTGTGGGCCGGAAGAAAGAGACCGTGGAGACCGTACTGCGTCGGGAAAGGCAGC
GTCAGGCGTCCCTGAAGAAGGAGGCCCATCAATGA

Upstream 100 bases:

>100_bases
CAAATTCAAAGGATTTGGGGAAGCTCTGGCTTCCTAAATATCCTACGGGGCTGCCCCGGCCTCAAGTGCGACCACGCATG
GCGCGAAAGGGGGTTTTTAT

Downstream 100 bases:

>100_bases
ACACGCTGTTCTGCCCCTGGGCTCCCGTCTGGGACGCCCACATCGAGGTTGCCCGACTGCGGGGCGTCGTGGATCTGATT
GCCATCCTTACCGGCCCCGT

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA
VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA
FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE
HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ

Sequences:

>Translated_304_residues
MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA
VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA
FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE
HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ
>Mature_304_residues
MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLNELCRPLFGGNAFGDPREEQA
VHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDSDMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVA
FFLKSEQALERSKKISRYFVAFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE
HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKKEAHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34233; Mature: 34233

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLN
CCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ELCRPLFGGNAFGDPREEQAVHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDS
HHHHHHHCCCCCCCCCHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
DMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVAFFLKSEQALERSKKISRYFV
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKK
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EAHQ
HCCC
>Mature Secondary Structure
MDRMVRVAGIPRGPGRYRRCVGTTRAFLRPNPKTYGGRTMSNKHSIAPEHPSHPSFDSLN
CCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ELCRPLFGGNAFGDPREEQAVHLLPGREPFMLDRQVAAVYGVPTRRLMEQVRRNAQHFDS
HHHHHHHCCCCCCCCCHHCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
DMLFQLTAEELKSLRSQNATAPVNQYLPYGFTQIGANHVAFFLKSEQALERSKKISRYFV
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AFENLLRSAKGRSELGKLARSQPETAPQTGAVPDGKTLMDTDRVIEMYELIIAMQKEKIE
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HLKSGAGSRKAVSLEEVRRILKLAAAGYGYADIAKAVGRKKETVETVLRRERQRQASLKK
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EAHQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA