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The map label for this gene is 85858129

Identifier: 85858129

GI number: 85858129

Start: 296976

End: 297812

Strand: Direct

Name: 85858129

Synonym: SYN_00074

Alternate gene names: NA

Gene position: 296976-297812 (Clockwise)

Preceding gene: 85858128

Following gene: 85858130

Centisome position: 9.34

GC content: 53.05

Gene sequence:

>837_bases
ATGGACGATAGGCTTATCAAAAGATCCCTGATCGCGGGTTCATGGTATCCAGGAAGTCCTCGAGTCCTGAGCAGGGACAT
TATGGATTACTTCGACAATGTGCCCGGCAAGACTGTTCAGGGGCGGATTCTGGGGCTCGTCGCTCCCCATGCGGGATACA
TGTATTCCGGTCAGGTTGCAGCACACGCCTATAAAGAAATAAAAGGACAGACTTACGATGTTGTCTTCGTTATCGGACCC
AGTCATAGGGCATTCTTTCGGGGGGTGTCCCTGTTCAAGGAGGGGGGATACGAAACCCCTCTGGGCATCGTCGATGTCCA
TGAGGACATGGCTGCCCGGCTTCTGGAGCAGGATCCTCGAATTGCCTTTCTGCCGGATGTCCATCTACAGGAACACTCCG
TTGAAATACAGCTCCCCTTTCTGCAGGTCGCTCTCGGTGAGTTCAGCTTTGTTCCCCTGATCATGGGCGATCAGGATTAT
GAGACGTGCAGGGTTCTGGCCGATGCGATTGTCAACTGCTGTGGAAATAAACAAGTTTTAATTGTAGGGAGTTCGGATTT
GTCTCATTATCATGGCTATGAGCAGGCCGTTAGAATGGATTCACGAATCCTCGAACATCTCCGTAAAATGGACGAGTGCG
GCTTGATCAGAGATTTGAGCAGTGGAACCGGTGAGGCCTGCGGCGGCGGCCCGGCTGCCGTGACCATGATGGTGGCCAGG
CAACTGGGTGCGGATAAGGCGGCTGTTCTGAAATACGCCAATTCCGGTGATGTGACCGGAGACAGGAGTGGAGTAGTCGG
CTATGCAGCAGCGGTCTTTTATGAAGGGGAATCTTGA

Upstream 100 bases:

>100_bases
GAGATCGGAACTTTTATCTGTCGCAGAAAATGCCCTGGCCGCTCTATAGATTAGGATAAACCGACTTGCGGGCAGCTGGG
GTGGAACGGAGGAAGTTGCT

Downstream 100 bases:

>100_bases
TTGGCCGAATCGCCGGGCCGGTGATGAAGGCATAGACAGGGGGAATGGGAATGAGTTTATCACCAGAGGATAAAAAGGCA
TTGCTGAGTATCGTTCGATC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDDRLIKRSLIAGSWYPGSPRVLSRDIMDYFDNVPGKTVQGRILGLVAPHAGYMYSGQVAAHAYKEIKGQTYDVVFVIGP
SHRAFFRGVSLFKEGGYETPLGIVDVHEDMAARLLEQDPRIAFLPDVHLQEHSVEIQLPFLQVALGEFSFVPLIMGDQDY
ETCRVLADAIVNCCGNKQVLIVGSSDLSHYHGYEQAVRMDSRILEHLRKMDECGLIRDLSSGTGEACGGGPAAVTMMVAR
QLGADKAAVLKYANSGDVTGDRSGVVGYAAAVFYEGES

Sequences:

>Translated_278_residues
MDDRLIKRSLIAGSWYPGSPRVLSRDIMDYFDNVPGKTVQGRILGLVAPHAGYMYSGQVAAHAYKEIKGQTYDVVFVIGP
SHRAFFRGVSLFKEGGYETPLGIVDVHEDMAARLLEQDPRIAFLPDVHLQEHSVEIQLPFLQVALGEFSFVPLIMGDQDY
ETCRVLADAIVNCCGNKQVLIVGSSDLSHYHGYEQAVRMDSRILEHLRKMDECGLIRDLSSGTGEACGGGPAAVTMMVAR
QLGADKAAVLKYANSGDVTGDRSGVVGYAAAVFYEGES
>Mature_278_residues
MDDRLIKRSLIAGSWYPGSPRVLSRDIMDYFDNVPGKTVQGRILGLVAPHAGYMYSGQVAAHAYKEIKGQTYDVVFVIGP
SHRAFFRGVSLFKEGGYETPLGIVDVHEDMAARLLEQDPRIAFLPDVHLQEHSVEIQLPFLQVALGEFSFVPLIMGDQDY
ETCRVLADAIVNCCGNKQVLIVGSSDLSHYHGYEQAVRMDSRILEHLRKMDECGLIRDLSSGTGEACGGGPAAVTMMVAR
QLGADKAAVLKYANSGDVTGDRSGVVGYAAAVFYEGES

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=295, Percent_Identity=26.7796610169492, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI25146594, Length=253, Percent_Identity=28.0632411067194, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI32566861, Length=253, Percent_Identity=28.0632411067194, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6322467, Length=205, Percent_Identity=28.2926829268293, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21357419, Length=288, Percent_Identity=26.7361111111111, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 30294; Mature: 30294

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRLIKRSLIAGSWYPGSPRVLSRDIMDYFDNVPGKTVQGRILGLVAPHAGYMYSGQVA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEECCCCCCEECCHHH
AHAYKEIKGQTYDVVFVIGPSHRAFFRGVSLFKEGGYETPLGIVDVHEDMAARLLEQDPR
HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCC
IAFLPDVHLQEHSVEIQLPFLQVALGEFSFVPLIMGDQDYETCRVLADAIVNCCGNKQVL
EEECCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
IVGSSDLSHYHGYEQAVRMDSRILEHLRKMDECGLIRDLSSGTGEACGGGPAAVTMMVAR
EEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHH
QLGADKAAVLKYANSGDVTGDRSGVVGYAAAVFYEGES
HHCCCHHHEEEECCCCCCCCCCCCHHEEEEEEEECCCC
>Mature Secondary Structure
MDDRLIKRSLIAGSWYPGSPRVLSRDIMDYFDNVPGKTVQGRILGLVAPHAGYMYSGQVA
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEECCEEEEEECCCCCCEECCHHH
AHAYKEIKGQTYDVVFVIGPSHRAFFRGVSLFKEGGYETPLGIVDVHEDMAARLLEQDPR
HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCC
IAFLPDVHLQEHSVEIQLPFLQVALGEFSFVPLIMGDQDYETCRVLADAIVNCCGNKQVL
EEECCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEE
IVGSSDLSHYHGYEQAVRMDSRILEHLRKMDECGLIRDLSSGTGEACGGGPAAVTMMVAR
EEECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHH
QLGADKAAVLKYANSGDVTGDRSGVVGYAAAVFYEGES
HHCCCHHHEEEECCCCCCCCCCCCHHEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]