Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858085

Identifier: 85858085

GI number: 85858085

Start: 255799

End: 256086

Strand: Direct

Name: 85858085

Synonym: SYN_01436

Alternate gene names: NA

Gene position: 255799-256086 (Clockwise)

Preceding gene: 85858081

Following gene: 85858088

Centisome position: 8.05

GC content: 46.18

Gene sequence:

>288_bases
TTGCGGATACAGAAGCTGCCGGGAAAGGCTGTTTTTTATTCAGAGACCAGCAGTACCATCAAAAAGACTTTTATATTTCA
TACCTTCTATCAGGATAATTTCCGGCAAAATCAACTGGCATCAGTTTTCCGGCAATCGGTGGCGGCAAGGCCTGCTTCGG
ATTCTCGACTCATATTGTTTTTAACAGGAGCGGAACGCAAGGCAGGAATGACGGAATGTTCCGTATATGTGAGGGATGAG
AGGCGCACTTTTTCAGGGGAAGGTGATTACGATCCCTGCTGTCCATAA

Upstream 100 bases:

>100_bases
ATGAAAAATAAACATAAAAAGACTGCAATGTTATTATATGTATAATCCTTATGATAAGAGGATAATCATAATTGGTAAGC
TAACGTGAATATTAGAAATA

Downstream 100 bases:

>100_bases
CAACAAAAGCGCTCCCTGAGCTTGTGGCTCTTCACTGGAGCGCTTCTTTGTTTCTCGCCAATCTGGGTAATTAGATAGTA
GGGCGTTATATAGGTTTTAC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MRIQKLPGKAVFYSETSSTIKKTFIFHTFYQDNFRQNQLASVFRQSVAARPASDSRLILFLTGAERKAGMTECSVYVRDE
RRTFSGEGDYDPCCP

Sequences:

>Translated_95_residues
MRIQKLPGKAVFYSETSSTIKKTFIFHTFYQDNFRQNQLASVFRQSVAARPASDSRLILFLTGAERKAGMTECSVYVRDE
RRTFSGEGDYDPCCP
>Mature_95_residues
MRIQKLPGKAVFYSETSSTIKKTFIFHTFYQDNFRQNQLASVFRQSVAARPASDSRLILFLTGAERKAGMTECSVYVRDE
RRTFSGEGDYDPCCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10870; Mature: 10870

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQKLPGKAVFYSETSSTIKKTFIFHTFYQDNFRQNQLASVFRQSVAARPASDSRLILF
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
LTGAERKAGMTECSVYVRDERRTFSGEGDYDPCCP
EECCCCCCCCCEEEEEEECCCEEECCCCCCCCCCC
>Mature Secondary Structure
MRIQKLPGKAVFYSETSSTIKKTFIFHTFYQDNFRQNQLASVFRQSVAARPASDSRLILF
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
LTGAERKAGMTECSVYVRDERRTFSGEGDYDPCCP
EECCCCCCCCCEEEEEEECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA