| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858053
Identifier: 85858053
GI number: 85858053
Start: 214184
End: 215035
Strand: Direct
Name: 85858053
Synonym: SYN_02572
Alternate gene names: NA
Gene position: 214184-215035 (Clockwise)
Preceding gene: 85858050
Following gene: 85858054
Centisome position: 6.74
GC content: 49.3
Gene sequence:
>852_bases ATGAGTTCTGATAAACAGTTGCGTCGGTTCAAGGGAGCCTCGAAATATATTCTCGACGAGGAACTCTCCAAAATCGTAAA CGTTTCTATTGCCATTGAAATGCCGCTTCTGTTGAAGGGTGAGCCGGGTACGGGAAAAACCATGCTGGCTCACGCGATAG CGGAAAGTCTTCAGATGCCGCTGATTATCCTGAATGTCAAATCAAGCATGAAGCTGCTGGAAGCGCTTTATCAGTATGAC ACCCTGACTCGACTGAACGACAGCCGTTTTGGTGATTCTCAGCGGGATGTCAGCAATATCGAAGAATATATCAAAATGGG AAAAATCGGCCAGGCCTTTGTTTCCGACGTGCGCACGGTTCTGCTCATCGACGAGATCGATAAGGCCGATACGGATTTTC AGGATGACATGCTGGATGTGCTCGATCAGATGCAGTTCGACATCATCGAGATCGACAAGACGATCCAGGCGAAGCACCGG CCGGTGATCGTGATCACATCCAATGCCAAAAAAGATCTGTCGGATCCCTTCCTGGGGCGATGCAATTTCCATCACATTGC CTTTCCCGATCCTGATGTGATGCGACAGATCGTCAATGTCCATTTCCCCAACATTCATGATGACATAGCGGAAGCCTGCA TTACCACGTTTTATCGGCTGCGGGAATTTCGCGGCATCGAGAAAAAACCGGCGACGCGGGAACTGATCAACTGGATTCGC GCCCTTCATGCCGATCCTGATTTCAATGTCAAGAAACTGCACAAGGGAGAGTCGCCCTATCTCGGCATTCTGTTCAAGAA GAGCGGGGATTTGAATCTTGCCATGCAGCAGATATCACGCCTGAGGATATAA
Upstream 100 bases:
>100_bases CTGAGAAAAAATGTGTTCAAAACCATTCTGAATATCAGGAATATGATCATTTTCTGCAATTAACCCCGGTGTTATGAATC GGGTATAAGGAGTTTATGTT
Downstream 100 bases:
>100_bases GGGGGGGGGAGTTTCTTGTTTATCCAGTTTTTTTACACCCTCCGGGAAAAAGGGATCCCCGTTTCCCCCACCTCTTTCCT GCGCCTTCAGAAGGCGCTGA
Product: MoxR-like ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; ATPase Central Domain-Containing Protein; AAA Family ATPase; ATPase AAA Family Protein; AAA_5 ATPase; ATPase-Like Protein; AAA ATPase; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATPase Associated With Various Cellular Activities; ATPase Protein; Aaa ATPase; ATP-Dependent Protease; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSSDKQLRRFKGASKYILDEELSKIVNVSIAIEMPLLLKGEPGTGKTMLAHAIAESLQMPLIILNVKSSMKLLEALYQYD TLTRLNDSRFGDSQRDVSNIEEYIKMGKIGQAFVSDVRTVLLIDEIDKADTDFQDDMLDVLDQMQFDIIEIDKTIQAKHR PVIVITSNAKKDLSDPFLGRCNFHHIAFPDPDVMRQIVNVHFPNIHDDIAEACITTFYRLREFRGIEKKPATRELINWIR ALHADPDFNVKKLHKGESPYLGILFKKSGDLNLAMQQISRLRI
Sequences:
>Translated_283_residues MSSDKQLRRFKGASKYILDEELSKIVNVSIAIEMPLLLKGEPGTGKTMLAHAIAESLQMPLIILNVKSSMKLLEALYQYD TLTRLNDSRFGDSQRDVSNIEEYIKMGKIGQAFVSDVRTVLLIDEIDKADTDFQDDMLDVLDQMQFDIIEIDKTIQAKHR PVIVITSNAKKDLSDPFLGRCNFHHIAFPDPDVMRQIVNVHFPNIHDDIAEACITTFYRLREFRGIEKKPATRELINWIR ALHADPDFNVKKLHKGESPYLGILFKKSGDLNLAMQQISRLRI >Mature_282_residues SSDKQLRRFKGASKYILDEELSKIVNVSIAIEMPLLLKGEPGTGKTMLAHAIAESLQMPLIILNVKSSMKLLEALYQYDT LTRLNDSRFGDSQRDVSNIEEYIKMGKIGQAFVSDVRTVLLIDEIDKADTDFQDDMLDVLDQMQFDIIEIDKTIQAKHRP VIVITSNAKKDLSDPFLGRCNFHHIAFPDPDVMRQIVNVHFPNIHDDIAEACITTFYRLREFRGIEKKPATRELINWIRA LHADPDFNVKKLHKGESPYLGILFKKSGDLNLAMQQISRLRI
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32371; Mature: 32240
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDKQLRRFKGASKYILDEELSKIVNVSIAIEMPLLLKGEPGTGKTMLAHAIAESLQMP CCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCC LIILNVKSSMKLLEALYQYDTLTRLNDSRFGDSQRDVSNIEEYIKMGKIGQAFVSDVRTV EEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH LLIDEIDKADTDFQDDMLDVLDQMQFDIIEIDKTIQAKHRPVIVITSNAKKDLSDPFLGR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC CNFHHIAFPDPDVMRQIVNVHFPNIHDDIAEACITTFYRLREFRGIEKKPATRELINWIR CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALHADPDFNVKKLHKGESPYLGILFKKSGDLNLAMQQISRLRI HHCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure SSDKQLRRFKGASKYILDEELSKIVNVSIAIEMPLLLKGEPGTGKTMLAHAIAESLQMP CCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCC LIILNVKSSMKLLEALYQYDTLTRLNDSRFGDSQRDVSNIEEYIKMGKIGQAFVSDVRTV EEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH LLIDEIDKADTDFQDDMLDVLDQMQFDIIEIDKTIQAKHRPVIVITSNAKKDLSDPFLGR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC CNFHHIAFPDPDVMRQIVNVHFPNIHDDIAEACITTFYRLREFRGIEKKPATRELINWIR CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALHADPDFNVKKLHKGESPYLGILFKKSGDLNLAMQQISRLRI HHCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA