Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857938

Identifier: 85857938

GI number: 85857938

Start: 93771

End: 94826

Strand: Direct

Name: 85857938

Synonym: SYN_00147

Alternate gene names: NA

Gene position: 93771-94826 (Clockwise)

Preceding gene: 85857937

Following gene: 85857939

Centisome position: 2.95

GC content: 55.68

Gene sequence:

>1056_bases
GTGAAGGCGGAAGAGTATTATAAGGGATACCTTGTCAACCCTGAACTGTTAGCCAAAGACCCGCATCTTTCCAAGGGATG
CGAAACCTGCCACAAGGGCGACAAAAGCGGTGAAACGAAAGAGCAGGCCCACGAGGGCATGGTGAAGCGGCCATCGGACA
ATCTCAAGACCTGCGGCCAATGCCACGGAAAGATCGCCGCCGCCTATGGGAAATCTCTTCATTACACAACGATCGGCCAG
CGGCAGGGGGTCATGGCAAGGTTTTCCAAGGCGGAACTCAAGATCTTCGACAAGCGCGTCTTCGAACAATCCTGCCGGAG
CTGCCACGCCTCCTGCGGTGGATGTCATGTGAAATCACCACCGGTATCCGGGATCAGCCTCGGCCTGATCCAGGGGCATA
AATTTGTCAGGAAGGATGAAGGCAAGACCTGCGCCTTTTGCCATGGCGGACGTGTCTATCCGGAATATGTGGGCGAATAC
GGCGGGGCAACGGATGTCCACTACCAGAAAGGAATGATGTGCCTTGACTGCCACAAGAAACGGGAATTCCACGGCGACGG
AAAGAAATATCTCACCAAGCAGGCGGTGAAAGACCGTCCCGCCTGCACGAACTGCCACAAGACGATCAACTCGAAGACAC
TGCTGACAAAGAAGGCCCACAGCGTTCACCGGGGCAAGGTGAGCTGCTACGGCTGCCACTCGGGCGGCCAGTATCGGAAC
TGTTATGACTGCCATGAAGGGACGGGTGCTAAGGCGGAGCCAGGTTTTATCCTGGGGAAAAACCCCCGGAACACGAAGGA
GGTCACAACACTGCGTGTTATCCCGACTGTCCGGAATTCCTTTGAGAAGGTGGGAATCCGCATGGAGAAATTCGATGCCC
TCCCCAATTACTGGAATTCGCCGGTCCACAATATCCGGAAGCGTACGGACCGGACTCGCTCCTGCGATTCATGTCATACG
GATCGCACCGGGTTCCTGACGTGGGAAACCCTCCTGAAAGGAGGAGCCAAGGCGAATGAACGGCTGATCCACACTCCAAA
ACCCATAACCCGATAA

Upstream 100 bases:

>100_bases
GTGCATTTCCTGCCATACAGATGATCAAAAGATGAAGTCCCTGGTCAAACCACCGGCTATCGGCGGCGAAGGCGAGGGGT
GAGCGGGGGCGCCTCCGCCC

Downstream 100 bases:

>100_bases
ACGGTATTACAATGATCAAACGGGGTAAGGTATCCCGGCAAATTCCCACTCCTGTTAAATACAAAAGTCTGAAGGAAAGA
GGCGGTCATGGATGCAGTTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ
RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY
GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN
CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT
DRTGFLTWETLLKGGAKANERLIHTPKPITR

Sequences:

>Translated_351_residues
MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ
RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY
GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN
CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT
DRTGFLTWETLLKGGAKANERLIHTPKPITR
>Mature_351_residues
MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ
RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY
GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN
CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT
DRTGFLTWETLLKGGAKANERLIHTPKPITR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39242; Mature: 39242

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQ
CCCCHHHCCEECCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
CHGKIAAAYGKSLHYTTIGQRQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSP
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEYGGATDVHYQKGMMCLDCHKK
CCCCEEEEHHHCCHHHCCCCCCEEEEECCCEECHHHHHCCCCCCCCHHHCCCEEEEHHHH
REFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN
HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNS
CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCC
PVHNIRKRTDRTRSCDSCHTDRTGFLTWETLLKGGAKANERLIHTPKPITR
HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQ
CCCCHHHCCEECCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
CHGKIAAAYGKSLHYTTIGQRQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSP
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEYGGATDVHYQKGMMCLDCHKK
CCCCEEEEHHHCCHHHCCCCCCEEEEECCCEECHHHHHCCCCCCCCHHHCCCEEEEHHHH
REFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN
HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNS
CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCC
PVHNIRKRTDRTRSCDSCHTDRTGFLTWETLLKGGAKANERLIHTPKPITR
HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA