| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85857922
Identifier: 85857922
GI number: 85857922
Start: 79447
End: 79611
Strand: Direct
Name: 85857922
Synonym: SYN_03270
Alternate gene names: NA
Gene position: 79447-79611 (Clockwise)
Preceding gene: 85857921
Following gene: 85857923
Centisome position: 2.5
GC content: 51.52
Gene sequence:
>165_bases GTGTGCTGCGATACGGAATTGGAAGCGGACTCCCGCCGGGGAAGGCCGCATCCTGCCCTTGAACGGTTTTTAAAAATCGT TGGTGTTTTTTCTCTTTTTCTGTTAGGGAGTTCCCGTCATTTTTCGGCAGGCCGTTTCTTTAAGGAGAGATGCCCGAGAG GCTGA
Upstream 100 bases:
>100_bases AGCTCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCAGTTATTGCTTCGGGAAGCAATCCAAATCCGGATTCGGAATGAG GTGCAAGGCACCGGCGCAGA
Downstream 100 bases:
>100_bases AGGGGCACGACTGGAAATCGTGTGTATGTCCACAAAGATGTACCGGGGGTTCGAATCCCCCTCTCTCCGCCAGTCCCTGT TATTTTCCCGAAAGCGGTCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MCCDTELEADSRRGRPHPALERFLKIVGVFSLFLLGSSRHFSAGRFFKERCPRG
Sequences:
>Translated_54_residues MCCDTELEADSRRGRPHPALERFLKIVGVFSLFLLGSSRHFSAGRFFKERCPRG >Mature_54_residues MCCDTELEADSRRGRPHPALERFLKIVGVFSLFLLGSSRHFSAGRFFKERCPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6185; Mature: 6185
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCDTELEADSRRGRPHPALERFLKIVGVFSLFLLGSSRHFSAGRFFKERCPRG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MCCDTELEADSRRGRPHPALERFLKIVGVFSLFLLGSSRHFSAGRFFKERCPRG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA