Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857902

Identifier: 85857902

GI number: 85857902

Start: 60184

End: 61059

Strand: Direct

Name: 85857902

Synonym: SYN_00035

Alternate gene names: NA

Gene position: 60184-61059 (Clockwise)

Preceding gene: 85857886

Following gene: 85857905

Centisome position: 1.89

GC content: 56.96

Gene sequence:

>876_bases
GTGTCCGTTTTGAGTTTTTTTCTTTCCTTGGCGGCCGCCGCGGGGTTGGCGACTTCCGATGCCCTGACGAAGCGGTTTTT
CAGTGACCGCTCCGCTTATGAGATGGGGCTGATCCGTCTGGCTTATACTGTTCCCTGGCTGCTTGCCGCGTCTCTTTTTA
TCTCTCCGGCGAAAACGGACGGGGTGTTCTGGTCCTGCGTCCTGGTTGGGCTGCCTTTAGAGGTGCTGTCCTTTCTGTGC
TACATGAAAGCCCTCAAGGTGTCGCCGCTTTCCCTGTCGCTTCCTTTTCTGGCCTTCACCCCCGGCTTCATTATTCTGAC
CGGATGGCTTATCCTGGGAGAAAGGCTCAGCGCCGGAGGGCTGGCCGGCATCATGCTGATTATTGCCGGTTCCTACTGCC
TTAATATTTCTTCCTTGAAACAGGGGGCTCTTCAGCCGTTCCGGGCTATCATCCGGGAGCCGGGCTCAAGGTTGATGCTG
CTGGTTTCCTTTATTTATGCCTTTACGTCCACTGTGGGGAAACTGGCGATTCTGCACTCCAGTCCGGCTTACTTCGGCAT
TGTATATTACCTGCTCTTCACAGGCCTCATGTTTGCCGGTCTGGCCTTTATCGGGAAAAGATCCGGGAACATCCTGCGGA
CGCGGACTCCGGCCATGGCGCTGGCGCTGGGGGCGACGGTGGCCGTGACGATTTTCAGCCACATGCTGGCCATTTCATTG
ACCCAGGCTGCTTACATGATCGCCCTGAAGCGGACCAGCCTGCTGATCGGCGTACTTTACGGGGCCTGGTGGTTCCGGGA
GGAAAAGATCATGGAAAGACTGACGGGGGCCTCGCTCATGGCGACCGGAGCCCTGTTGATCGGTTTGTTGGGATAG

Upstream 100 bases:

>100_bases
CAGGAATTTTCCCATCATGGGGAGGACTGATTTTAGTGGGGATAAGTACTTATTTTTCTCTCAGGAAAAGGATGAGAAAC
AGAGAATCTGAGGCCGGGCT

Downstream 100 bases:

>100_bases
AAATTCAGAAAGAAGCAGCGCGTCCGGATGTTTACGGCACTTTGCGCGGGTCAGCTCAGATTTTCGTATTCTTCCTGTTT
GATCGTCTGGAGGGTGGCTG

Product: DMT family permease

Products: NA

Alternate protein names: DMT Superfamily Permease Protein; DMT Family Permease

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSVLSFFLSLAAAAGLATSDALTKRFFSDRSAYEMGLIRLAYTVPWLLAASLFISPAKTDGVFWSCVLVGLPLEVLSFLC
YMKALKVSPLSLSLPFLAFTPGFIILTGWLILGERLSAGGLAGIMLIIAGSYCLNISSLKQGALQPFRAIIREPGSRLML
LVSFIYAFTSTVGKLAILHSSPAYFGIVYYLLFTGLMFAGLAFIGKRSGNILRTRTPAMALALGATVAVTIFSHMLAISL
TQAAYMIALKRTSLLIGVLYGAWWFREEKIMERLTGASLMATGALLIGLLG

Sequences:

>Translated_291_residues
MSVLSFFLSLAAAAGLATSDALTKRFFSDRSAYEMGLIRLAYTVPWLLAASLFISPAKTDGVFWSCVLVGLPLEVLSFLC
YMKALKVSPLSLSLPFLAFTPGFIILTGWLILGERLSAGGLAGIMLIIAGSYCLNISSLKQGALQPFRAIIREPGSRLML
LVSFIYAFTSTVGKLAILHSSPAYFGIVYYLLFTGLMFAGLAFIGKRSGNILRTRTPAMALALGATVAVTIFSHMLAISL
TQAAYMIALKRTSLLIGVLYGAWWFREEKIMERLTGASLMATGALLIGLLG
>Mature_290_residues
SVLSFFLSLAAAAGLATSDALTKRFFSDRSAYEMGLIRLAYTVPWLLAASLFISPAKTDGVFWSCVLVGLPLEVLSFLCY
MKALKVSPLSLSLPFLAFTPGFIILTGWLILGERLSAGGLAGIMLIIAGSYCLNISSLKQGALQPFRAIIREPGSRLMLL
VSFIYAFTSTVGKLAILHSSPAYFGIVYYLLFTGLMFAGLAFIGKRSGNILRTRTPAMALALGATVAVTIFSHMLAISLT
QAAYMIALKRTSLLIGVLYGAWWFREEKIMERLTGASLMATGALLIGLLG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31309; Mature: 31178

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLSFFLSLAAAAGLATSDALTKRFFSDRSAYEMGLIRLAYTVPWLLAASLFISPAKTD
CHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVFWSCVLVGLPLEVLSFLCYMKALKVSPLSLSLPFLAFTPGFIILTGWLILGERLSAGG
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHHHCCCCH
LAGIMLIIAGSYCLNISSLKQGALQPFRAIIREPGSRLMLLVSFIYAFTSTVGKLAILHS
HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEC
SPAYFGIVYYLLFTGLMFAGLAFIGKRSGNILRTRTPAMALALGATVAVTIFSHMLAISL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TQAAYMIALKRTSLLIGVLYGAWWFREEKIMERLTGASLMATGALLIGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVLSFFLSLAAAAGLATSDALTKRFFSDRSAYEMGLIRLAYTVPWLLAASLFISPAKTD
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVFWSCVLVGLPLEVLSFLCYMKALKVSPLSLSLPFLAFTPGFIILTGWLILGERLSAGG
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHHHCCCCH
LAGIMLIIAGSYCLNISSLKQGALQPFRAIIREPGSRLMLLVSFIYAFTSTVGKLAILHS
HHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEC
SPAYFGIVYYLLFTGLMFAGLAFIGKRSGNILRTRTPAMALALGATVAVTIFSHMLAISL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TQAAYMIALKRTSLLIGVLYGAWWFREEKIMERLTGASLMATGALLIGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA