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The map label for this gene is 85857854

Identifier: 85857854

GI number: 85857854

Start: 11704

End: 12480

Strand: Direct

Name: 85857854

Synonym: SYN_02043

Alternate gene names: NA

Gene position: 11704-12480 (Clockwise)

Preceding gene: 85857853

Following gene: 85857855

Centisome position: 0.37

GC content: 37.19

Gene sequence:

>777_bases
ATGGATTTATCTCCGGCTATAAATCAAGTCGTAGGCAAGTTATGGTATTTGATTCCAATCATTATCTTAATAATTTTAAT
AAAATCTGCCTGGTTCAAAGGGGTGATGGGAGAATTCATTGTAAACGTCTTTGCAAGGATACTATTAGATAAAAATGTGT
ATCATCTCATCAAGAATGTGACATTACCAACCGAAGACGGAACGACACAGATTGATCATATCATCGTTTCAAGATATGGC
ATATTTGTAGTTGAAACAAAATATATGAAAGGGTGGATTTTTGGTAGCCCCAATCAGAAGACATGGACTCAAAAAATATA
CAAGCATTCAAACAATTTCCAAAACCCTCTGCACCAAAATTACAAACACGTAAAAACTCTTGAATCCCTGCTTGATCTGA
GTGATCAGCAGGTTTATCCGTTGGTTGTTTTTGTCGGAGATAGTACTTTCAAAACAGAAATGCCTGAAAATGTTACACAT
GGCCGTGGTTATGTTCGATATATCAAATCAAAAAGACAGCTTGTCCTCTCTGAAGCAGAGGTTGACGCAATCTTAAACAA
AATCAGTGCCGGCATGTTGACGCGCTCATTTAAAACCAACAGGGAGCATGTAAAACATGTCAACCATATCAGAAGCGAAA
AGAGGAAGAAAAATACCTGTCCAAAGTGTGGTAGCCCCATGGTGCTGAGAGAAGCAAAAAATGGTCAAAATGCTGGAAAG
CAATTTTGGGGATGTTCAAATTTTCCAAAATGCAAAGGTATTCTAAATGTCACATAA

Upstream 100 bases:

>100_bases
TAACGACGTGTAACCCGTCACCCCGTCATTACAGCCGATCGCAACCCGCTGGGTTGCTCCGGCTGAGCTTTTCGTTATGT
GGGAAAGGTAAGAATTTAGG

Downstream 100 bases:

>100_bases
CGAGACGCCAGAGCCGATCGCAGCCCGCGGGACTGCTCCGGCTCAGCTTTTCATTAGACGTATGGTGAAAACACTTTTAT
ATTAAGCGAGATCAAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDLSPAINQVVGKLWYLIPIIILIILIKSAWFKGVMGEFIVNVFARILLDKNVYHLIKNVTLPTEDGTTQIDHIIVSRYG
IFVVETKYMKGWIFGSPNQKTWTQKIYKHSNNFQNPLHQNYKHVKTLESLLDLSDQQVYPLVVFVGDSTFKTEMPENVTH
GRGYVRYIKSKRQLVLSEAEVDAILNKISAGMLTRSFKTNREHVKHVNHIRSEKRKKNTCPKCGSPMVLREAKNGQNAGK
QFWGCSNFPKCKGILNVT

Sequences:

>Translated_258_residues
MDLSPAINQVVGKLWYLIPIIILIILIKSAWFKGVMGEFIVNVFARILLDKNVYHLIKNVTLPTEDGTTQIDHIIVSRYG
IFVVETKYMKGWIFGSPNQKTWTQKIYKHSNNFQNPLHQNYKHVKTLESLLDLSDQQVYPLVVFVGDSTFKTEMPENVTH
GRGYVRYIKSKRQLVLSEAEVDAILNKISAGMLTRSFKTNREHVKHVNHIRSEKRKKNTCPKCGSPMVLREAKNGQNAGK
QFWGCSNFPKCKGILNVT
>Mature_258_residues
MDLSPAINQVVGKLWYLIPIIILIILIKSAWFKGVMGEFIVNVFARILLDKNVYHLIKNVTLPTEDGTTQIDHIIVSRYG
IFVVETKYMKGWIFGSPNQKTWTQKIYKHSNNFQNPLHQNYKHVKTLESLLDLSDQQVYPLVVFVGDSTFKTEMPENVTH
GRGYVRYIKSKRQLVLSEAEVDAILNKISAGMLTRSFKTNREHVKHVNHIRSEKRKKNTCPKCGSPMVLREAKNGQNAGK
QFWGCSNFPKCKGILNVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 NERD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011528 [H]

Pfam domain/function: PF08378 NERD [H]

EC number: NA

Molecular weight: Translated: 29591; Mature: 29591

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSPAINQVVGKLWYLIPIIILIILIKSAWFKGVMGEFIVNVFARILLDKNVYHLIKNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
TLPTEDGTTQIDHIIVSRYGIFVVETKYMKGWIFGSPNQKTWTQKIYKHSNNFQNPLHQN
CCCCCCCCHHHHHHHHHHCCEEEEEEHHHCEEEECCCCCHHHHHHHHHHCCCCCCHHHHH
YKHVKTLESLLDLSDQQVYPLVVFVGDSTFKTEMPENVTHGRGYVRYIKSKRQLVLSEAE
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VDAILNKISAGMLTRSFKTNREHVKHVNHIRSEKRKKNTCPKCGSPMVLREAKNGQNAGK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHH
QFWGCSNFPKCKGILNVT
HCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLSPAINQVVGKLWYLIPIIILIILIKSAWFKGVMGEFIVNVFARILLDKNVYHLIKNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
TLPTEDGTTQIDHIIVSRYGIFVVETKYMKGWIFGSPNQKTWTQKIYKHSNNFQNPLHQN
CCCCCCCCHHHHHHHHHHCCEEEEEEHHHCEEEECCCCCHHHHHHHHHHCCCCCCHHHHH
YKHVKTLESLLDLSDQQVYPLVVFVGDSTFKTEMPENVTHGRGYVRYIKSKRQLVLSEAE
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VDAILNKISAGMLTRSFKTNREHVKHVNHIRSEKRKKNTCPKCGSPMVLREAKNGQNAGK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHH
QFWGCSNFPKCKGILNVT
HCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10515943; 12004073 [H]