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The map label for this gene is traH [H]

Identifier: 85375783

GI number: 85375783

Start: 2983691

End: 2985040

Strand: Reverse

Name: traH [H]

Synonym: ELI_14780

Alternate gene names: 85375783

Gene position: 2985040-2983691 (Counterclockwise)

Preceding gene: 85375784

Following gene: 85375782

Centisome position: 97.79

GC content: 60.96

Gene sequence:

>1350_bases
ATGGACCGCTTCATGGATGACATGGGCGCAGCGGCCAATGTCACCGGCCCGACCGCCTTCGAAGGCCAGTCGGCGGGCTA
TTACAGCCTCGGCAATGTCTGGACGCGCTTTCCGCAAAAGACGACCAACATCGCCAATCTGCAACTCCCAAGGGCACGGG
CAGGCTGCGGCGGGATCGACATCTTCGCCGGATCCTTTTCGTTCATCAATGCAAGCGAGATGGTCGCGCTCTTGAAGGCG
GTCGCCAACAACGCGGTCGGCTTCGCCTTCAGCCTGGCGATCGATACGGTCTGCCCCGAGTGCAACAAGATCATGCAGGA
GTTCAGCCAAAAGGCTCAGCTGATGAACAATCTCTCGATCAACTCCTGCGAGATGGCGCAAGGGCTGGTCGGCGGTATCT
GGCCAAAGGGTGACCTCGCCGACAAGGCGATCTGCGAAGCCATCGGCAATTCCGAAGGTATCTTCACCGACTACGCCGCT
GCCAAGCACGGCTGCGGGACACGCGGGCAGCGCGCTTCGACCAATGAAAGCGCAGGCGCCGACTATGCCGACGTCAATCC
GGGTGTGCCGCGCAATTACACCTGGCACGTTCTCAAGCAGAGCGCCTTCTTCAACCCGGGCGGCACATTCGACCGCGACC
TTGCCGAGTATGCGATGACGCTTATCGGCACGGTGATTTATGTGCCGCCGAGCGACGATGAGCCGGGCAAGTTCGTACCC
TTTGCTGGCGACGCCTCCTCGACACTGGTGACCGCGCTGCTCGATGGGACGCAGGACCAGTCGGTTCGGGTGTTCCAGTG
CGATGAGCCCGATCAATGCCTCAACCCAACCTTTCAGCAGATGAGCCTGACGAACACAAAAGCCATCCGGCCACGTGTCG
CAAGGCTCATTGGCAGCATGGTCGAGGCGATCCGCAGCGACACCGCCATTGGAGACGAAGAAAAGGAACTGCTCCAGGTC
GCCTCGGTGCCGCTCTACAAGATCCTGACGGTGCAGGCGGCCTATGGCCGCGGCATGCCGACTGACGATCGCGACACCCT
GGCCGAGATCGCCAGCATTGATCTCCTCTATGCCATACTCGAAAGGATAACGGCCGAGGCTGGCCGGTCGATGGCAAGCT
TCATCGCGGCCGATGAAGCCAAGCTCGCTATCTGGCGCGCTCAGGTCGCCGAAGTACGTTCAAGCCTCTCACAGCGACAG
GCAACCGGCCAAGCGCGGGTCTCCGCGATCATGCAGATCATCGAGAAGACCGCGATGATCGAAAACATGCTTGCAGCATC
GATGTCGCCGTCGATGGCGGCAGCCCTCGACTGGTCACGCGGGATGCAGTCCCGCTCGATCATTCCATAA

Upstream 100 bases:

>100_bases
AAAGAAGCCGGACATGATTACTAGAATTCGCAATGCAGCGCTTACCATAGCCGCAGCCAGCATGGTCGTATCACCGGTTG
CAGCTAATGTCGGAGACAGC

Downstream 100 bases:

>100_bases
GGAGCAGTCGGGATGGTCGAGATCTTCACGATTGGCGGCGGCGAATATATCGTCAACGTGCTCAATGCGGTCGCCGCATG
GACTGGGGCTGGCGGCTATA

Product: pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MDRFMDDMGAAANVTGPTAFEGQSAGYYSLGNVWTRFPQKTTNIANLQLPRARAGCGGIDIFAGSFSFINASEMVALLKA
VANNAVGFAFSLAIDTVCPECNKIMQEFSQKAQLMNNLSINSCEMAQGLVGGIWPKGDLADKAICEAIGNSEGIFTDYAA
AKHGCGTRGQRASTNESAGADYADVNPGVPRNYTWHVLKQSAFFNPGGTFDRDLAEYAMTLIGTVIYVPPSDDEPGKFVP
FAGDASSTLVTALLDGTQDQSVRVFQCDEPDQCLNPTFQQMSLTNTKAIRPRVARLIGSMVEAIRSDTAIGDEEKELLQV
ASVPLYKILTVQAAYGRGMPTDDRDTLAEIASIDLLYAILERITAEAGRSMASFIAADEAKLAIWRAQVAEVRSSLSQRQ
ATGQARVSAIMQIIEKTAMIENMLAASMSPSMAAALDWSRGMQSRSIIP

Sequences:

>Translated_449_residues
MDRFMDDMGAAANVTGPTAFEGQSAGYYSLGNVWTRFPQKTTNIANLQLPRARAGCGGIDIFAGSFSFINASEMVALLKA
VANNAVGFAFSLAIDTVCPECNKIMQEFSQKAQLMNNLSINSCEMAQGLVGGIWPKGDLADKAICEAIGNSEGIFTDYAA
AKHGCGTRGQRASTNESAGADYADVNPGVPRNYTWHVLKQSAFFNPGGTFDRDLAEYAMTLIGTVIYVPPSDDEPGKFVP
FAGDASSTLVTALLDGTQDQSVRVFQCDEPDQCLNPTFQQMSLTNTKAIRPRVARLIGSMVEAIRSDTAIGDEEKELLQV
ASVPLYKILTVQAAYGRGMPTDDRDTLAEIASIDLLYAILERITAEAGRSMASFIAADEAKLAIWRAQVAEVRSSLSQRQ
ATGQARVSAIMQIIEKTAMIENMLAASMSPSMAAALDWSRGMQSRSIIP
>Mature_449_residues
MDRFMDDMGAAANVTGPTAFEGQSAGYYSLGNVWTRFPQKTTNIANLQLPRARAGCGGIDIFAGSFSFINASEMVALLKA
VANNAVGFAFSLAIDTVCPECNKIMQEFSQKAQLMNNLSINSCEMAQGLVGGIWPKGDLADKAICEAIGNSEGIFTDYAA
AKHGCGTRGQRASTNESAGADYADVNPGVPRNYTWHVLKQSAFFNPGGTFDRDLAEYAMTLIGTVIYVPPSDDEPGKFVP
FAGDASSTLVTALLDGTQDQSVRVFQCDEPDQCLNPTFQQMSLTNTKAIRPRVARLIGSMVEAIRSDTAIGDEEKELLQV
ASVPLYKILTVQAAYGRGMPTDDRDTLAEIASIDLLYAILERITAEAGRSMASFIAADEAKLAIWRAQVAEVRSSLSQRQ
ATGQARVSAIMQIIEKTAMIENMLAASMSPSMAAALDWSRGMQSRSIIP

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 48204; Mature: 48204

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFMDDMGAAANVTGPTAFEGQSAGYYSLGNVWTRFPQKTTNIANLQLPRARAGCGGID
CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCEECCCHHCCCCCEE
IFAGSFSFINASEMVALLKAVANNAVGFAFSLAIDTVCPECNKIMQEFSQKAQLMNNLSI
EEECCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
NSCEMAQGLVGGIWPKGDLADKAICEAIGNSEGIFTDYAAAKHGCGTRGQRASTNESAGA
CHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCC
DYADVNPGVPRNYTWHVLKQSAFFNPGGTFDRDLAEYAMTLIGTVIYVPPSDDEPGKFVP
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCEEE
FAGDASSTLVTALLDGTQDQSVRVFQCDEPDQCLNPTFQQMSLTNTKAIRPRVARLIGSM
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
VEAIRSDTAIGDEEKELLQVASVPLYKILTVQAAYGRGMPTDDRDTLAEIASIDLLYAIL
HHHHHHCCCCCCHHHHHHHHHCCCHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ERITAEAGRSMASFIAADEAKLAIWRAQVAEVRSSLSQRQATGQARVSAIMQIIEKTAMI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENMLAASMSPSMAAALDWSRGMQSRSIIP
HHHHHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDRFMDDMGAAANVTGPTAFEGQSAGYYSLGNVWTRFPQKTTNIANLQLPRARAGCGGID
CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCEECCCHHCCCCCEE
IFAGSFSFINASEMVALLKAVANNAVGFAFSLAIDTVCPECNKIMQEFSQKAQLMNNLSI
EEECCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
NSCEMAQGLVGGIWPKGDLADKAICEAIGNSEGIFTDYAAAKHGCGTRGQRASTNESAGA
CHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCC
DYADVNPGVPRNYTWHVLKQSAFFNPGGTFDRDLAEYAMTLIGTVIYVPPSDDEPGKFVP
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCEEE
FAGDASSTLVTALLDGTQDQSVRVFQCDEPDQCLNPTFQQMSLTNTKAIRPRVARLIGSM
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
VEAIRSDTAIGDEEKELLQVASVPLYKILTVQAAYGRGMPTDDRDTLAEIASIDLLYAIL
HHHHHHCCCCCCHHHHHHHHHCCCHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
ERITAEAGRSMASFIAADEAKLAIWRAQVAEVRSSLSQRQATGQARVSAIMQIIEKTAMI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENMLAASMSPSMAAALDWSRGMQSRSIIP
HHHHHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]