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The map label for this gene is ynaI [C]

Identifier: 85375692

GI number: 85375692

Start: 2878130

End: 2879212

Strand: Reverse

Name: ynaI [C]

Synonym: ELI_14325

Alternate gene names: 85375692

Gene position: 2879212-2878130 (Counterclockwise)

Preceding gene: 85375693

Following gene: 85375689

Centisome position: 94.33

GC content: 65.1

Gene sequence:

>1083_bases
ATGCTCGAACGCTACAATCCGCAAAACTGGTCGATCAACTGGATCGAGGTGGGCGAATCGGCGCTGATCGTCTTCGTTGC
GGTATCGATCGCGTGGCTCGTCTACCGCGTGGCCTTCGCGATTGCCCACCGGCTTGCGCGCGGATCGGACACGCCGCTCG
ACGAGATGGTGATCAGCAAGATCGAACGCCCGATCAAATGGGCGCTGATCGCGATCAGCATCACGCTCGTGGCCGAAGCC
AACGATACGCTTGCTGCCATCTGGGAGCCGATCGCGCGCTTCGTCCGCCCGGCCCTGCTCGGCTGGATCGTCTACACTCT
GGTCAAGGCCTTCACCGCCGCGCTCGAATACCGGCTCGAAACCCATGATGACGATGTCGCGACCTTGCGCAGCCGCAAGA
CGCGGATCGCCATCCTCTCGCGCACGGCCACCTTCGTCATCGTCTTCATCACCGTCGGCCTGATGCTGCTGAGTATCCCG
CAGGTCGCGGCGATCGGGACCACGGTGCTCGCCTCGGCCGGTATCGCCGCCCTCGCCGTGGGTGCAGCGGCCCAGCCGGC
GCTCAAATCGCTGATTGCGGGCTTGCAGATGGCGCTGACCGAGCCGCTCAGGATCGGCGATCTGGTCGTGGTCGACGGAC
ATACCGGGCGGGTCGAGGAAATCCGCATGAGCTTCGTCACCGTGCGCACGTGGGACGAGCGGGTCATCGTGGTGCCGACC
AGCCAGTTCCTCGACGAGAGCTTCGAGAACTGGACCCGCGGCAGCGAAATGCTGACCGGGCCGGTCTTCCTGCATCTCGA
TCCGATCACCGACGTCGCGCCCATCCGCGCCGAGTTCGAACGCTATGTCGCCGGCCACGAACTATGGGACAAGCGCACCG
CCGCGTTGCTGGTGACGGAAGCCTATCCCGAAAGCGTGGAACTGCGCCTGTCGGTCAGCGCACATACCGTCGGCGACCTC
TGGCAGATCCGCTGCGATGTGCGCGAACACATGCTGGCGTGGCTGCGAGAGAACCAGGAAGTCGCGCTGATCCGCCACCG
GCTGGAAGTGCCGCACGGACACCCCAAGGCCGGCGAGCCCTGA

Upstream 100 bases:

>100_bases
GGAAACGCTAGGGTGACACGGTGTCACCCTTGTCACCCTCTCTTCGCCTCTCGGGCGGCAATTCTTGAATCCCGCGCCTC
ACCCCCATAGGTGGCAGTCC

Downstream 100 bases:

>100_bases
TAGCGGCGCGCCGCTAGCTCTCGGGGTCGCCGTGCTTGCTGTCGCGCGTGCTTTCCAGCATGCCTTCATGCAGGAACCCG
ATCGGTTGCACCCTCGCGGC

Product: small-conductance mechanosensitive channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MLERYNPQNWSINWIEVGESALIVFVAVSIAWLVYRVAFAIAHRLARGSDTPLDEMVISKIERPIKWALIAISITLVAEA
NDTLAAIWEPIARFVRPALLGWIVYTLVKAFTAALEYRLETHDDDVATLRSRKTRIAILSRTATFVIVFITVGLMLLSIP
QVAAIGTTVLASAGIAALAVGAAAQPALKSLIAGLQMALTEPLRIGDLVVVDGHTGRVEEIRMSFVTVRTWDERVIVVPT
SQFLDESFENWTRGSEMLTGPVFLHLDPITDVAPIRAEFERYVAGHELWDKRTAALLVTEAYPESVELRLSVSAHTVGDL
WQIRCDVREHMLAWLRENQEVALIRHRLEVPHGHPKAGEP

Sequences:

>Translated_360_residues
MLERYNPQNWSINWIEVGESALIVFVAVSIAWLVYRVAFAIAHRLARGSDTPLDEMVISKIERPIKWALIAISITLVAEA
NDTLAAIWEPIARFVRPALLGWIVYTLVKAFTAALEYRLETHDDDVATLRSRKTRIAILSRTATFVIVFITVGLMLLSIP
QVAAIGTTVLASAGIAALAVGAAAQPALKSLIAGLQMALTEPLRIGDLVVVDGHTGRVEEIRMSFVTVRTWDERVIVVPT
SQFLDESFENWTRGSEMLTGPVFLHLDPITDVAPIRAEFERYVAGHELWDKRTAALLVTEAYPESVELRLSVSAHTVGDL
WQIRCDVREHMLAWLRENQEVALIRHRLEVPHGHPKAGEP
>Mature_360_residues
MLERYNPQNWSINWIEVGESALIVFVAVSIAWLVYRVAFAIAHRLARGSDTPLDEMVISKIERPIKWALIAISITLVAEA
NDTLAAIWEPIARFVRPALLGWIVYTLVKAFTAALEYRLETHDDDVATLRSRKTRIAILSRTATFVIVFITVGLMLLSIP
QVAAIGTTVLASAGIAALAVGAAAQPALKSLIAGLQMALTEPLRIGDLVVVDGHTGRVEEIRMSFVTVRTWDERVIVVPT
SQFLDESFENWTRGSEMLTGPVFLHLDPITDVAPIRAEFERYVAGHELWDKRTAALLVTEAYPESVELRLSVSAHTVGDL
WQIRCDVREHMLAWLRENQEVALIRHRLEVPHGHPKAGEP

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 40087; Mature: 40087

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERYNPQNWSINWIEVGESALIVFVAVSIAWLVYRVAFAIAHRLARGSDTPLDEMVISK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IERPIKWALIAISITLVAEANDTLAAIWEPIARFVRPALLGWIVYTLVKAFTAALEYRLE
HCCCHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
THDDDVATLRSRKTRIAILSRTATFVIVFITVGLMLLSIPQVAAIGTTVLASAGIAALAV
CCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
GAAAQPALKSLIAGLQMALTEPLRIGDLVVVDGHTGRVEEIRMSFVTVRTWDERVIVVPT
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEECCCEEEEEEC
SQFLDESFENWTRGSEMLTGPVFLHLDPITDVAPIRAEFERYVAGHELWDKRTAALLVTE
HHHHHHHHHHHCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEE
AYPESVELRLSVSAHTVGDLWQIRCDVREHMLAWLRENQEVALIRHRLEVPHGHPKAGEP
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLERYNPQNWSINWIEVGESALIVFVAVSIAWLVYRVAFAIAHRLARGSDTPLDEMVISK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IERPIKWALIAISITLVAEANDTLAAIWEPIARFVRPALLGWIVYTLVKAFTAALEYRLE
HCCCHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
THDDDVATLRSRKTRIAILSRTATFVIVFITVGLMLLSIPQVAAIGTTVLASAGIAALAV
CCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHH
GAAAQPALKSLIAGLQMALTEPLRIGDLVVVDGHTGRVEEIRMSFVTVRTWDERVIVVPT
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHEEEEEECCCEEEEEEC
SQFLDESFENWTRGSEMLTGPVFLHLDPITDVAPIRAEFERYVAGHELWDKRTAALLVTE
HHHHHHHHHHHCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEE
AYPESVELRLSVSAHTVGDLWQIRCDVREHMLAWLRENQEVALIRHRLEVPHGHPKAGEP
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]