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The map label for this gene is etfB [H]

Identifier: 85375528

GI number: 85375528

Start: 2722290

End: 2723036

Strand: Reverse

Name: etfB [H]

Synonym: ELI_13505

Alternate gene names: 85375528

Gene position: 2723036-2722290 (Counterclockwise)

Preceding gene: 85375531

Following gene: 85375527

Centisome position: 89.21

GC content: 63.72

Gene sequence:

>747_bases
ATGAAAATCCTCGTCCCCGTCAAACGGGTGATCGACTATAACGTGAAGCCGCGCGTCAAGGCGGATGGTTCCGGCGTCGA
CCTGGCCAACGTCAAGATGAGCATGAACCCGTTCGACGAGATCGCTGTCGAAGAAGCGATCCGGATCAAGGAAGCGGGCA
AGGCGGAAGAAATCGTCGCTGTCTCCATCGGTCCGGCCAAGGCGCAGGAAACCCTGCGCACCGCCCTCGCCATGGGCGCC
GACCGCGCGATCCTGGTCGAGACCGATGATGAAGTCGAACCGCTCGCCGTCGCCAAGATCCTCAAGGCGATCGCCGAAGA
GGAACAGCCCGGCATCGTGATGCTCGGCAAGCAGTCGATTTCGGACGACAGCAACCAGACCGGCCAGATGCTCGCCGCCC
TCACGGGCCGCCCGCAAGGCACATTCGCCAACACCGTCGAGGTCGACGGCGACAGCGTGACCGTCAAGCGCGAAGTCGAC
GGCGGTCTCGAAACCGTCAAGCTGACGCTCCCGGCGATCATCACCACCGACCTGCGCCTGAACGAGCCGCGCTATGCTTC
GCTGCCCAACATCATGAAGGCCAAGAAGAAGCCGCTCGATACCAAGTCGCCCGCCGATTACGGCGTCGACATCGCGCCGC
GCCTGACCACCACCAACGTTGCCGAGCCGCCCGTGCGGCAGGCCGGCGAGAAGGTCGAAGACGTCGATGCGCTCGTCGCC
AAGATCAAGGCGCTGGGCATCGCATAA

Upstream 100 bases:

>100_bases
CATTCGGCGTCGACCGCCTAAACTTGACGTTTACGTAAACGCAAGCTAGGCCGGTGGCAACGATTGCTGCCAATGATTCT
TTTGAGAGGAAGGACTTCCC

Downstream 100 bases:

>100_bases
ATCCCGCATTCCCCGTTCGCCCTGAGCTTGTCGAAGGGTTGTCCTTACTTTGAGGGCATCGGGACAGAAAAAAGTACAGG
GCTTCGACAAGCTCAGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKILVPVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRIKEAGKAEEIVAVSIGPAKAQETLRTALAMGA
DRAILVETDDEVEPLAVAKILKAIAEEEQPGIVMLGKQSISDDSNQTGQMLAALTGRPQGTFANTVEVDGDSVTVKREVD
GGLETVKLTLPAIITTDLRLNEPRYASLPNIMKAKKKPLDTKSPADYGVDIAPRLTTTNVAEPPVRQAGEKVEDVDALVA
KIKALGIA

Sequences:

>Translated_248_residues
MKILVPVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRIKEAGKAEEIVAVSIGPAKAQETLRTALAMGA
DRAILVETDDEVEPLAVAKILKAIAEEEQPGIVMLGKQSISDDSNQTGQMLAALTGRPQGTFANTVEVDGDSVTVKREVD
GGLETVKLTLPAIITTDLRLNEPRYASLPNIMKAKKKPLDTKSPADYGVDIAPRLTTTNVAEPPVRQAGEKVEDVDALVA
KIKALGIA
>Mature_248_residues
MKILVPVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRIKEAGKAEEIVAVSIGPAKAQETLRTALAMGA
DRAILVETDDEVEPLAVAKILKAIAEEEQPGIVMLGKQSISDDSNQTGQMLAALTGRPQGTFANTVEVDGDSVTVKREVD
GGLETVKLTLPAIITTDLRLNEPRYASLPNIMKAKKKPLDTKSPADYGVDIAPRLTTTNVAEPPVRQAGEKVEDVDALVA
KIKALGIA

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=250, Percent_Identity=57.6, Blast_Score=284, Evalue=6e-77,
Organism=Homo sapiens, GI62420877, Length=233, Percent_Identity=57.0815450643777, Blast_Score=262, Evalue=2e-70,
Organism=Escherichia coli, GI87081682, Length=236, Percent_Identity=27.5423728813559, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=252, Percent_Identity=55.5555555555556, Blast_Score=253, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=50, Blast_Score=233, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24651147, Length=249, Percent_Identity=57.8313253012048, Blast_Score=266, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24651145, Length=249, Percent_Identity=57.8313253012048, Blast_Score=266, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26446; Mature: 26446

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRIKEAGKAEEIVA
CEEEEEHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE
VSIGPAKAQETLRTALAMGADRAILVETDDEVEPLAVAKILKAIAEEEQPGIVMLGKQSI
EEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
SDDSNQTGQMLAALTGRPQGTFANTVEVDGDSVTVKREVDGGLETVKLTLPAIITTDLRL
CCCCCCHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDTKSPADYGVDIAPRLTTTNVAEPPVRQAGEKVEDVDALVA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KIKALGIA
HHHHHCCC
>Mature Secondary Structure
MKILVPVKRVIDYNVKPRVKADGSGVDLANVKMSMNPFDEIAVEEAIRIKEAGKAEEIVA
CEEEEEHHHHHCCCCCCCEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE
VSIGPAKAQETLRTALAMGADRAILVETDDEVEPLAVAKILKAIAEEEQPGIVMLGKQSI
EEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
SDDSNQTGQMLAALTGRPQGTFANTVEVDGDSVTVKREVDGGLETVKLTLPAIITTDLRL
CCCCCCHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDTKSPADYGVDIAPRLTTTNVAEPPVRQAGEKVEDVDALVA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KIKALGIA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]