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The map label for this gene is yebA [H]

Identifier: 85375471

GI number: 85375471

Start: 2662631

End: 2663764

Strand: Reverse

Name: yebA [H]

Synonym: ELI_13220

Alternate gene names: 85375471

Gene position: 2663764-2662631 (Counterclockwise)

Preceding gene: 85375481

Following gene: 85375470

Centisome position: 87.27

GC content: 65.61

Gene sequence:

>1134_bases
GTGGCAAACTGGTTTCCGGATCGCGAGTTCTTCATGCGCTCGCAAGGACAAGTCCGTTTCATCAAGGTATCGTCGCGCCT
GCAGAAGATGGCGGCCACCGCCGTCGTGGCTGCGTTGCTGGTGTGGATCGTCAGCATGGGCGTGATGAGCTTCCTGCAAT
ATCGCGCACAGGCCGACCGGCTCTCTTTGCTCGAGCGCGAGGCGGAAGTCGCCACGGCGCAAGACCGGGTCGACGCGTAT
CGCGACGACCTCGGTGCCGTAACCGAAGACCTGCAAAAGCGGCAGGAATTTCTCGAAGCCATGGCTGCCGCCATCCCCGA
CGATGTGAAGGCGGAAGAAGGCGACACCGTCACCGACAGCACGACCGAAGCCGCCGCGACGATCGACAAGGTCAGCGCGT
CGATCCCCGAAGCCGCTGCGCTCGCCGAGCTCGAAGCGCGCCAGATCGCTTTCGTGGAGAAACTGACCCGCTTCGCAGAT
CGCCGCGCCCTTCGGGCCGAGCGCGCTCTGCGCCAGCTCGGCCTCAACCCGCAATCGATGCTGCGCGGCGCCGAACGCGA
AGCGATGGGTGGTCCGCTCGAACTGCTTGCCACCAGCGCAAGTGGCGAGATCGACCCGCGCTTCGAGCGGCTCGGCCTGA
GCCTGGCGCGCATGTCCGCTCTCGAACGCGGTCTCGACGCAGTGCCGCAGTTCACCCCGACCAATGTCGGCCAGACCAGC
ATTTCCTCGGGCTACGGCTATCGCCGCGACCCGTTCAACGGCGGTGGTGCAATGCATTCCGGGCTCGATTTCAAAGGTCC
GAACGGCGCACCGATCTACGCCGCTGCCAAGGGCACCGTCAGCTACGTCGGCTGGAAGTCGGGCTATGGCAAGACCGTGG
AGATCGATCACGGCAACGGCCTGATGACCCGCTACGCCCACATGTCGCGCTTCGTTGCAAAGCGCGGCCAGAAGGTCGAT
GCGGGGTCGCCCATCGGCGCGATCGGCAGCACCGGCCGCTCGACCGGCCCGCACCTGCACTTCGAAGTGCGCATCAACGA
GCGCGCGGTCAATCCGCGCCCCTTCCTGGAGGCAGCCCCCAATGTTCTCAAAGAAGCCCGCCGAGCCGGCACCGAGGCCG
ACACCAATGGCTAA

Upstream 100 bases:

>100_bases
ACCGATTCGCTTGCTAGCGCCCCGGCGGGATCAAGAAAACAGACCGAAAAGCGGGGTCGCTTTGCAAAAATCACTCTCAA
CCGGCGGGTTTGCCGCGCGC

Downstream 100 bases:

>100_bases
GAGCCCCAATTCCTCCGGCAGCTTCTCTGTCATCGGCGGGGACGTGACCATCACCGGCAATATCAGCGCCTCGACCGAAT
TGCATGTCGATGGCACCATC

Product: peptidase M23/M37

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MANWFPDREFFMRSQGQVRFIKVSSRLQKMAATAVVAALLVWIVSMGVMSFLQYRAQADRLSLLEREAEVATAQDRVDAY
RDDLGAVTEDLQKRQEFLEAMAAAIPDDVKAEEGDTVTDSTTEAAATIDKVSASIPEAAALAELEARQIAFVEKLTRFAD
RRALRAERALRQLGLNPQSMLRGAEREAMGGPLELLATSASGEIDPRFERLGLSLARMSALERGLDAVPQFTPTNVGQTS
ISSGYGYRRDPFNGGGAMHSGLDFKGPNGAPIYAAAKGTVSYVGWKSGYGKTVEIDHGNGLMTRYAHMSRFVAKRGQKVD
AGSPIGAIGSTGRSTGPHLHFEVRINERAVNPRPFLEAAPNVLKEARRAGTEADTNG

Sequences:

>Translated_377_residues
MANWFPDREFFMRSQGQVRFIKVSSRLQKMAATAVVAALLVWIVSMGVMSFLQYRAQADRLSLLEREAEVATAQDRVDAY
RDDLGAVTEDLQKRQEFLEAMAAAIPDDVKAEEGDTVTDSTTEAAATIDKVSASIPEAAALAELEARQIAFVEKLTRFAD
RRALRAERALRQLGLNPQSMLRGAEREAMGGPLELLATSASGEIDPRFERLGLSLARMSALERGLDAVPQFTPTNVGQTS
ISSGYGYRRDPFNGGGAMHSGLDFKGPNGAPIYAAAKGTVSYVGWKSGYGKTVEIDHGNGLMTRYAHMSRFVAKRGQKVD
AGSPIGAIGSTGRSTGPHLHFEVRINERAVNPRPFLEAAPNVLKEARRAGTEADTNG
>Mature_376_residues
ANWFPDREFFMRSQGQVRFIKVSSRLQKMAATAVVAALLVWIVSMGVMSFLQYRAQADRLSLLEREAEVATAQDRVDAYR
DDLGAVTEDLQKRQEFLEAMAAAIPDDVKAEEGDTVTDSTTEAAATIDKVSASIPEAAALAELEARQIAFVEKLTRFADR
RALRAERALRQLGLNPQSMLRGAEREAMGGPLELLATSASGEIDPRFERLGLSLARMSALERGLDAVPQFTPTNVGQTSI
SSGYGYRRDPFNGGGAMHSGLDFKGPNGAPIYAAAKGTVSYVGWKSGYGKTVEIDHGNGLMTRYAHMSRFVAKRGQKVDA
GSPIGAIGSTGRSTGPHLHFEVRINERAVNPRPFLEAAPNVLKEARRAGTEADTNG

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=116, Percent_Identity=45.6896551724138, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=37.5, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI87082174, Length=107, Percent_Identity=37.3831775700935, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=38.3838383838384, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 40852; Mature: 40720

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANWFPDREFFMRSQGQVRFIKVSSRLQKMAATAVVAALLVWIVSMGVMSFLQYRAQADR
CCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLEREAEVATAQDRVDAYRDDLGAVTEDLQKRQEFLEAMAAAIPDDVKAEEGDTVTDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TTEAAATIDKVSASIPEAAALAELEARQIAFVEKLTRFADRRALRAERALRQLGLNPQSM
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LRGAEREAMGGPLELLATSASGEIDPRFERLGLSLARMSALERGLDAVPQFTPTNVGQTS
HCCHHHHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
ISSGYGYRRDPFNGGGAMHSGLDFKGPNGAPIYAAAKGTVSYVGWKSGYGKTVEIDHGNG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCC
LMTRYAHMSRFVAKRGQKVDAGSPIGAIGSTGRSTGPHLHFEVRINERAVNPRPFLEAAP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH
NVLKEARRAGTEADTNG
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ANWFPDREFFMRSQGQVRFIKVSSRLQKMAATAVVAALLVWIVSMGVMSFLQYRAQADR
CCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLEREAEVATAQDRVDAYRDDLGAVTEDLQKRQEFLEAMAAAIPDDVKAEEGDTVTDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
TTEAAATIDKVSASIPEAAALAELEARQIAFVEKLTRFADRRALRAERALRQLGLNPQSM
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LRGAEREAMGGPLELLATSASGEIDPRFERLGLSLARMSALERGLDAVPQFTPTNVGQTS
HCCHHHHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
ISSGYGYRRDPFNGGGAMHSGLDFKGPNGAPIYAAAKGTVSYVGWKSGYGKTVEIDHGNG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCC
LMTRYAHMSRFVAKRGQKVDAGSPIGAIGSTGRSTGPHLHFEVRINERAVNPRPFLEAAP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH
NVLKEARRAGTEADTNG
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]