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The map label for this gene is 85375362

Identifier: 85375362

GI number: 85375362

Start: 2564906

End: 2565592

Strand: Direct

Name: 85375362

Synonym: ELI_12675

Alternate gene names: NA

Gene position: 2564906-2565592 (Clockwise)

Preceding gene: 85375361

Following gene: 85375363

Centisome position: 84.03

GC content: 64.77

Gene sequence:

>687_bases
ATGACGGGTTTGTTGATGGGAAGCGCCGCCCCGGGTCTCGCCCAATCCTACCAATGCCGCGTATCCGGCAATCTGCTGGT
GCCCGAACAGCGGCAGGACGGCCCGACGCGGCAGCTGCCCGTCACCGGCTACACGCTGGCGCTCAGCTGGTCGCCCGAGT
TCTGTCGCACCCGCCAGTCTTCGCGCCGCGATGCGACGCAATGTTCTGGGCGGACCGGGCGCTTCGGCCTGATCGTCCAC
GGCCTGTGGCCCGACGGGCGTGACATCTGGCCGCAATATTGCGGCACCGCGCGCACGGTTTCCGTACCCGAGGCGAAGCG
CAACCTGTGCATGATGCCCTCGCCCCGCCTGATGGCACGGCAGTGGCAGAAACACGGCAGCTGCATGGCGCGCCGCCCGG
AAACCTATTTCAAGGTCACGCGCATCCTCTGGAATAGCCTGCGCATCCCCGACTACGACCGTCTGTCGCGACAAGACAAC
CTCACCGCAGGCGACATCCGCTGCGCCTTCGCCAGCGCCAATGGCACGCACTGGCAGCCCGAAATGGTCGGCGTGAAGCT
GAACGAGCGCGGCTGGCTGCAGGAATTGCGCCTGTGCTACGGCAAGAACTTTATGCCGGTGCGATGCAAACCCCGGCAAT
TGGGAGTGCGTGACAACATCGAAGCGAAGATTTGGCGAGGATTATGA

Upstream 100 bases:

>100_bases
TCATCATCGCGAGCGACGCAGTCGCGTGGCGATCCATGGAGCCGCCGCCGCTTTGCTCGCTTTGAGCCATGGATTGCCGC
GGCGCTTAGCGCTCCTCGCA

Downstream 100 bases:

>100_bases
GAGCATCTATTGGAGGACTTCGACATGCGTTTATGGCTCACGGGATTGGCGGCCTTAATGTTGGCGGCCTGCTCTGGTTT
AGCCAACGAGGCGGAATCAG

Product: ribonuclease T2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTGLLMGSAAPGLAQSYQCRVSGNLLVPEQRQDGPTRQLPVTGYTLALSWSPEFCRTRQSSRRDATQCSGRTGRFGLIVH
GLWPDGRDIWPQYCGTARTVSVPEAKRNLCMMPSPRLMARQWQKHGSCMARRPETYFKVTRILWNSLRIPDYDRLSRQDN
LTAGDIRCAFASANGTHWQPEMVGVKLNERGWLQELRLCYGKNFMPVRCKPRQLGVRDNIEAKIWRGL

Sequences:

>Translated_228_residues
MTGLLMGSAAPGLAQSYQCRVSGNLLVPEQRQDGPTRQLPVTGYTLALSWSPEFCRTRQSSRRDATQCSGRTGRFGLIVH
GLWPDGRDIWPQYCGTARTVSVPEAKRNLCMMPSPRLMARQWQKHGSCMARRPETYFKVTRILWNSLRIPDYDRLSRQDN
LTAGDIRCAFASANGTHWQPEMVGVKLNERGWLQELRLCYGKNFMPVRCKPRQLGVRDNIEAKIWRGL
>Mature_227_residues
TGLLMGSAAPGLAQSYQCRVSGNLLVPEQRQDGPTRQLPVTGYTLALSWSPEFCRTRQSSRRDATQCSGRTGRFGLIVHG
LWPDGRDIWPQYCGTARTVSVPEAKRNLCMMPSPRLMARQWQKHGSCMARRPETYFKVTRILWNSLRIPDYDRLSRQDNL
TAGDIRCAFASANGTHWQPEMVGVKLNERGWLQELRLCYGKNFMPVRCKPRQLGVRDNIEAKIWRGL

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNase T2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001568
- InterPro:   IPR018188 [H]

Pfam domain/function: PF00445 Ribonuclease_T2 [H]

EC number: NA

Molecular weight: Translated: 26000; Mature: 25869

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00530 RNASE_T2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLLMGSAAPGLAQSYQCRVSGNLLVPEQRQDGPTRQLPVTGYTLALSWSPEFCRTRQS
CCCEECCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH
SRRDATQCSGRTGRFGLIVHGLWPDGRDIWPQYCGTARTVSVPEAKRNLCMMPSPRLMAR
HCCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEECCHHHCCEECCCCCHHHHH
QWQKHGSCMARRPETYFKVTRILWNSLRIPDYDRLSRQDNLTAGDIRCAFASANGTHWQP
HHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCC
EMVGVKLNERGWLQELRLCYGKNFMPVRCKPRQLGVRDNIEAKIWRGL
EEEEEEECCCHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCEEEECCC
>Mature Secondary Structure 
TGLLMGSAAPGLAQSYQCRVSGNLLVPEQRQDGPTRQLPVTGYTLALSWSPEFCRTRQS
CCEECCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHH
SRRDATQCSGRTGRFGLIVHGLWPDGRDIWPQYCGTARTVSVPEAKRNLCMMPSPRLMAR
HCCCHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCCCEEEECCHHHCCEECCCCCHHHHH
QWQKHGSCMARRPETYFKVTRILWNSLRIPDYDRLSRQDNLTAGDIRCAFASANGTHWQP
HHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCC
EMVGVKLNERGWLQELRLCYGKNFMPVRCKPRQLGVRDNIEAKIWRGL
EEEEEEECCCHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]