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The map label for this gene is yfgC [C]

Identifier: 85375354

GI number: 85375354

Start: 2556549

End: 2557904

Strand: Direct

Name: yfgC [C]

Synonym: ELI_12635

Alternate gene names: 85375354

Gene position: 2556549-2557904 (Clockwise)

Preceding gene: 85375353

Following gene: 85375355

Centisome position: 83.76

GC content: 66.3

Gene sequence:

>1356_bases
ATGCGCGCGCTCCTGTATCTCGTCGCCTGCCTGGCTGCGATCACGCTGTCGGTTCAACCGGCGACGGCACAATCCGTCCT
GCGCGATGCGGAAACGGAAGCGCTGCTCGACGACATGGCCGCGCCGCTGGTCGAAGCGGCCGGGCTGCAACCCGGCAATG
TCGACATCGTGCTTATCAACGATCCGTCCATCAACGCCTTCGTGGCGGGCGGACAGATCGTTTACCTCCATTCGGGCCTG
ATCAACGCCGCCGATACCGCCAACGAAGTGCAGGGCGTGATCGCGCATGAACTCGGACACATCACCGGTGGACACATTAT
CCGCACCGGCGAGGGCCTTCAGCAGGCGAGCAACATCTCGATCCTCTCGCTGATCCTCGGCGCGGCGGCCTTTGCCGCGG
GCGCAGGCGATGCGGGCATGGCCGCGATCCTCGCAGGGCAGCGCGCCGCGCTTGGCAGCTTTCTCGCGTTCAGCCGGGTG
CAGGAAGCCTCCGCCGACGCGGCAGGCGCGGAATATCTGTCCAAGGCCGGGATTTCCGGTCGCGGGTCGCTCGCCTTCTT
CGGCAAGCTGCTCAACCAGGAATTCCGCTATGGCCGCAGCCAAGACGACGAAGCAGCCTTTACCCGCACTCACCCGCTCT
CGGGCGACCGCATAGCCCGCTTGCGCGAAACCTACAGCGTTGATCCTGCATGGGAAGCGCCCGGCGACGCCGCACTCGAA
GCGCGCTTCCAACGGGTCAAGGCCAAGCTCTACGGCTACTTGGCGGAGCCTAACCGCGTCGTGCGCGCCTATCCCGAAAC
CCGGCAGGACGTGCCTGCCCGCTATGCCCGTGCCTACGCCTTTCACAAGGATGCCCAGGTCGAACGCGCGCTCGACGAGG
CCGAGGGACTGCTGCTGACCGATCCCGACAATCCCTATTTTCTCGAGCTCAAAGGCCAGATCCTGCTCGAATCGGGGCGT
CCCGACGAAGCCCTGCCCGCCTTGCGGAGCGCCAACGAATTGAGCGGAAATCATCCCCTCATCGCCTCGATCTTCGGCCA
CGCTCTGATCGCGACCGAGGACGAAAGCAACCATACCGAAGCCGAGCGCGTGTTGCGCGCCGCAGTCGCGCGCGATCGCC
GCAATCCCTTCGCCTGGTACCAGCTCGGTGTGGTCTATGCCGCGCAGGGCGACATGCCGCGCGCGCGCCTCGCGACAGCC
GAGCGGGAAGTGATGACGCGGCAATACGGCCTCGCCCTTCGCAGCGCGCGGGTGGCCGAAGCGGGGCTGGAAGAGGGTAC
GCCGGACTGGCTGCGCGCGCAGGATATCCGCCTGCAGGCCGAAGCCGAACTTGAACGCCAGCGCGACGAACGGTAG

Upstream 100 bases:

>100_bases
GGTGAAGGCGGCGATATTCGGATTTCTCGCGGCGAGGGAGCACGGCGATCGGGCAACACCTTCATCGCCTATTCAGGCCG
CCGGAGGCTAATTGACCGCA

Downstream 100 bases:

>100_bases
CGCTCGAACATGGTCCGCAACGCGCTCCTCGTCCTCGCCGCCCTCGTCGCGGGCTTCGCCGGTGCCGGCATATTCAGCTG
GTCCGGGCTTGGGGATCGCC

Product: putative Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MRALLYLVACLAAITLSVQPATAQSVLRDAETEALLDDMAAPLVEAAGLQPGNVDIVLINDPSINAFVAGGQIVYLHSGL
INAADTANEVQGVIAHELGHITGGHIIRTGEGLQQASNISILSLILGAAAFAAGAGDAGMAAILAGQRAALGSFLAFSRV
QEASADAAGAEYLSKAGISGRGSLAFFGKLLNQEFRYGRSQDDEAAFTRTHPLSGDRIARLRETYSVDPAWEAPGDAALE
ARFQRVKAKLYGYLAEPNRVVRAYPETRQDVPARYARAYAFHKDAQVERALDEAEGLLLTDPDNPYFLELKGQILLESGR
PDEALPALRSANELSGNHPLIASIFGHALIATEDESNHTEAERVLRAAVARDRRNPFAWYQLGVVYAAQGDMPRARLATA
EREVMTRQYGLALRSARVAEAGLEEGTPDWLRAQDIRLQAEAELERQRDER

Sequences:

>Translated_451_residues
MRALLYLVACLAAITLSVQPATAQSVLRDAETEALLDDMAAPLVEAAGLQPGNVDIVLINDPSINAFVAGGQIVYLHSGL
INAADTANEVQGVIAHELGHITGGHIIRTGEGLQQASNISILSLILGAAAFAAGAGDAGMAAILAGQRAALGSFLAFSRV
QEASADAAGAEYLSKAGISGRGSLAFFGKLLNQEFRYGRSQDDEAAFTRTHPLSGDRIARLRETYSVDPAWEAPGDAALE
ARFQRVKAKLYGYLAEPNRVVRAYPETRQDVPARYARAYAFHKDAQVERALDEAEGLLLTDPDNPYFLELKGQILLESGR
PDEALPALRSANELSGNHPLIASIFGHALIATEDESNHTEAERVLRAAVARDRRNPFAWYQLGVVYAAQGDMPRARLATA
EREVMTRQYGLALRSARVAEAGLEEGTPDWLRAQDIRLQAEAELERQRDER
>Mature_451_residues
MRALLYLVACLAAITLSVQPATAQSVLRDAETEALLDDMAAPLVEAAGLQPGNVDIVLINDPSINAFVAGGQIVYLHSGL
INAADTANEVQGVIAHELGHITGGHIIRTGEGLQQASNISILSLILGAAAFAAGAGDAGMAAILAGQRAALGSFLAFSRV
QEASADAAGAEYLSKAGISGRGSLAFFGKLLNQEFRYGRSQDDEAAFTRTHPLSGDRIARLRETYSVDPAWEAPGDAALE
ARFQRVKAKLYGYLAEPNRVVRAYPETRQDVPARYARAYAFHKDAQVERALDEAEGLLLTDPDNPYFLELKGQILLESGR
PDEALPALRSANELSGNHPLIASIFGHALIATEDESNHTEAERVLRAAVARDRRNPFAWYQLGVVYAAQGDMPRARLATA
EREVMTRQYGLALRSARVAEAGLEEGTPDWLRAQDIRLQAEAELERQRDER

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=322, Percent_Identity=27.639751552795, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082185, Length=185, Percent_Identity=32.972972972973, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 48605; Mature: 48605

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLYLVACLAAITLSVQPATAQSVLRDAETEALLDDMAAPLVEAAGLQPGNVDIVLIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
DPSINAFVAGGQIVYLHSGLINAADTANEVQGVIAHELGHITGGHIIRTGEGLQQASNIS
CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCHH
ILSLILGAAAFAAGAGDAGMAAILAGQRAALGSFLAFSRVQEASADAAGAEYLSKAGISG
HHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
RGSLAFFGKLLNQEFRYGRSQDDEAAFTRTHPLSGDRIARLRETYSVDPAWEAPGDAALE
CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
ARFQRVKAKLYGYLAEPNRVVRAYPETRQDVPARYARAYAFHKDAQVERALDEAEGLLLT
HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEE
DPDNPYFLELKGQILLESGRPDEALPALRSANELSGNHPLIASIFGHALIATEDESNHTE
CCCCCEEEEEECEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCHHH
AERVLRAAVARDRRNPFAWYQLGVVYAAQGDMPRARLATAEREVMTRQYGLALRSARVAE
HHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLEEGTPDWLRAQDIRLQAEAELERQRDER
HCCCCCCCHHHHHHHCEEEHHHHHHHHCCCC
>Mature Secondary Structure
MRALLYLVACLAAITLSVQPATAQSVLRDAETEALLDDMAAPLVEAAGLQPGNVDIVLIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
DPSINAFVAGGQIVYLHSGLINAADTANEVQGVIAHELGHITGGHIIRTGEGLQQASNIS
CCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCHH
ILSLILGAAAFAAGAGDAGMAAILAGQRAALGSFLAFSRVQEASADAAGAEYLSKAGISG
HHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
RGSLAFFGKLLNQEFRYGRSQDDEAAFTRTHPLSGDRIARLRETYSVDPAWEAPGDAALE
CCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
ARFQRVKAKLYGYLAEPNRVVRAYPETRQDVPARYARAYAFHKDAQVERALDEAEGLLLT
HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEE
DPDNPYFLELKGQILLESGRPDEALPALRSANELSGNHPLIASIFGHALIATEDESNHTE
CCCCCEEEEEECEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCCHHH
AERVLRAAVARDRRNPFAWYQLGVVYAAQGDMPRARLATAEREVMTRQYGLALRSARVAE
HHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLEEGTPDWLRAQDIRLQAEAELERQRDER
HCCCCCCCHHHHHHHCEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]