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The map label for this gene is ygaF [H]

Identifier: 85375294

GI number: 85375294

Start: 2491961

End: 2492434

Strand: Reverse

Name: ygaF [H]

Synonym: ELI_12335

Alternate gene names: 85375294

Gene position: 2492434-2491961 (Counterclockwise)

Preceding gene: 85375295

Following gene: 85375293

Centisome position: 81.65

GC content: 59.92

Gene sequence:

>474_bases
ATGAGCGAACGTCCCCACGAAGGCGATCCGATGCCCGATATCGTCATGGAGACCCCCGATGGCGGCAGCGTGAAGCCGTC
GGATTATGCAGGCAGGAAGCTCGTGCTGTTCTTCTATCCGAAGGATAATACGCCGGGCTGTACGACCGAAGCGACTGAGT
TTTCGGCGGCCAAGGCGGATTTCGAGAAAGCAGGTTGCGCGATCCTGGGGGTGAGCAAGGATTCGCCGAAGAAGCATCAG
AATTTCATCGCCAAGCACGGGCTTACGGTCGACCTGGCGACCGACGCGCAGGACGCTGGGCTTTCCGATGCGCTGGAAAT
CTGGACCGAGAAGAAGATGTACGGGAAGACCTTCATGGGAATGGTCCGCACCACCTACCTGGTCGACACAGACGGCACGA
TCGCCCGCGTATGGGACAAGGTGAAGGTGAAGGGCCACGTCGACGAAGCGCTGGCGGCGGCGCAGTCTCTTTGA

Upstream 100 bases:

>100_bases
GTGCTGGTCCGAAGGCCCTCTTGCATTCCCTGCGCCAGGCGCGGCAGAGCGTCGCCGAAGCTTGGCAGACCGTGTTCGAG
CAGGAACTGGAGATCGACTG

Downstream 100 bases:

>100_bases
GAAAAGCCCCGCCTTCCTTCGCGGTCGTACCGATGATGCTGGAGGCGCGGGGGCTCGACGCCACGTCGGCGACGCTGAAA
CGTATGCGTTCGCAGGGCGA

Product: putative bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSERPHEGDPMPDIVMETPDGGSVKPSDYAGRKLVLFFYPKDNTPGCTTEATEFSAAKADFEKAGCAILGVSKDSPKKHQ
NFIAKHGLTVDLATDAQDAGLSDALEIWTEKKMYGKTFMGMVRTTYLVDTDGTIARVWDKVKVKGHVDEALAAAQSL

Sequences:

>Translated_157_residues
MSERPHEGDPMPDIVMETPDGGSVKPSDYAGRKLVLFFYPKDNTPGCTTEATEFSAAKADFEKAGCAILGVSKDSPKKHQ
NFIAKHGLTVDLATDAQDAGLSDALEIWTEKKMYGKTFMGMVRTTYLVDTDGTIARVWDKVKVKGHVDEALAAAQSL
>Mature_156_residues
SERPHEGDPMPDIVMETPDGGSVKPSDYAGRKLVLFFYPKDNTPGCTTEATEFSAAKADFEKAGCAILGVSKDSPKKHQN
FIAKHGLTVDLATDAQDAGLSDALEIWTEKKMYGKTFMGMVRTTYLVDTDGTIARVWDKVKVKGHVDEALAAAQSL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=162, Percent_Identity=35.8024691358025, Blast_Score=68, Evalue=3e-12,
Organism=Escherichia coli, GI1788825, Length=144, Percent_Identity=36.1111111111111, Blast_Score=103, Evalue=4e-24,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17042; Mature: 16911

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERPHEGDPMPDIVMETPDGGSVKPSDYAGRKLVLFFYPKDNTPGCTTEATEFSAAKAD
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
FEKAGCAILGVSKDSPKKHQNFIAKHGLTVDLATDAQDAGLSDALEIWTEKKMYGKTFMG
HHHCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
MVRTTYLVDTDGTIARVWDKVKVKGHVDEALAAAQSL
HHHEEEEEECCCCHHHHHHHHEECCCHHHHHHHHHCC
>Mature Secondary Structure 
SERPHEGDPMPDIVMETPDGGSVKPSDYAGRKLVLFFYPKDNTPGCTTEATEFSAAKAD
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH
FEKAGCAILGVSKDSPKKHQNFIAKHGLTVDLATDAQDAGLSDALEIWTEKKMYGKTFMG
HHHCCEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
MVRTTYLVDTDGTIARVWDKVKVKGHVDEALAAAQSL
HHHEEEEEECCCCHHHHHHHHEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]