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The map label for this gene is 85375243

Identifier: 85375243

GI number: 85375243

Start: 2436768

End: 2438015

Strand: Direct

Name: 85375243

Synonym: ELI_12080

Alternate gene names: NA

Gene position: 2436768-2438015 (Clockwise)

Preceding gene: 85375237

Following gene: 85375247

Centisome position: 79.83

GC content: 61.06

Gene sequence:

>1248_bases
TTGCTTTACCAAGCCTATGAATTGCAGCGCAATTGGCTCAATTCGGTCAGTTCCATGGCCTCGATGAGCGCCGAGATGCT
GACCAGCCCGGCCAATCCGCTGAGCCATTTCGGTATCGGCTCCATGACCGCCAACGCGCTCGATGTGTTCGCACACGCCA
CGGCGAGCTACGCCAAACCGGCTTTCGGTATTACCGAAATCGAGAAAGACGGCGAACTTCACCCGGTCGAGGAAGCGACC
GTGGTCAACCGCCCGTTCGGCGACTTGAAGCGCTTCCGGCACACCGGCCTGCCCGAAAGCTCGCCCCGGCTGCTGATCGT
GGCACCGATGAGCGGGCACTATGCCACGCTGCTGCGCGGTACGGTCGAGCGCATGCTGCAAAGCTGCATCGTCTACATCA
CCGATTGGGCCGATGCGAAGCTGGTGCCGATGCACGAGGGCCATTTCGACCTCGACGATTACATCGATTACCTGATGGAA
TTCCTCGAACAGATCCGCGTGGAGAGTGACGGCCAGCGCCCTCATATGATGGCGGTGTGCCAGCCTTCTGTCCCGGCCTT
TGCCGCGACTGCGCTGCTCAATCAGAACAATTCGCCCGCCACCCCGCTGACGCTGACGATGATGGGCGGCCCGATCGACA
CGCGCGAAAGCCCGACCAGCGTCAACGACCATGCCATGAACCGTCCGATCGAATGGTTTCGCCAGTCGGTGATCGCGACC
GTGCCGATGCAGCATCGCGGCGCCGGACGCCGGGTCTATCCCGGCTTCATGCAGCTTTCGGCCTTCATGAGCATGAATCT
CGGCAACCACATGATGAGCCATTACGAGATGTTCAAACATCTCACCGCCGGAGATGAAGAGAGCGCGCAGGCCACCAAGG
ATTTCTACGACGAGTATCGCGCGGTGTGCGATATGACCGCTGAATTCTACCTCCAGACGGTCGAGGAGGTGTTCCAGAAG
CACTCGATCCCCAACGGCACGTTCCGCCATCGGGGCGAGCTCGTGGATCTCGATGCCATCACGGACACTGCACTATTGGC
CATCGAAGGCGAACGCGACGACATCTCGGGCCTCGGCCAGACCAAGGCCGCGCTCGACCTGGCCGATTGCCTGCCCGATG
CCAAGAAGCGGTACTTCATGGCCGAGGGCGCGGGGCACTACGGCATCTTCAACGGCAGCAAATGGCGCGACATGATCGCT
CCTGTCGTCGAAGAGTTCATCGACGAACACGGGGCTGTTCGCGCCTAG

Upstream 100 bases:

>100_bases
TGTGCATTGCACAATGCATCGATAGGGGCCACATTCGTGCCAACCACGGGCTGGGAGAGCCCGCAAGGGGAGCCGGAGAG
CTCCACGCAGGGGAAACGCA

Downstream 100 bases:

>100_bases
GTAGGCGGGCGCTCGACCTTGGGCGCCCGCAAGAAAATGCGCTTGATTACCCGCCGCGCCCATAACAGCAGTGCGATGAC
GAGCACCAGCAGAGTGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; PHB De-Polymerase Domain-Containing Protein; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MLYQAYELQRNWLNSVSSMASMSAEMLTSPANPLSHFGIGSMTANALDVFAHATASYAKPAFGITEIEKDGELHPVEEAT
VVNRPFGDLKRFRHTGLPESSPRLLIVAPMSGHYATLLRGTVERMLQSCIVYITDWADAKLVPMHEGHFDLDDYIDYLME
FLEQIRVESDGQRPHMMAVCQPSVPAFAATALLNQNNSPATPLTLTMMGGPIDTRESPTSVNDHAMNRPIEWFRQSVIAT
VPMQHRGAGRRVYPGFMQLSAFMSMNLGNHMMSHYEMFKHLTAGDEESAQATKDFYDEYRAVCDMTAEFYLQTVEEVFQK
HSIPNGTFRHRGELVDLDAITDTALLAIEGERDDISGLGQTKAALDLADCLPDAKKRYFMAEGAGHYGIFNGSKWRDMIA
PVVEEFIDEHGAVRA

Sequences:

>Translated_415_residues
MLYQAYELQRNWLNSVSSMASMSAEMLTSPANPLSHFGIGSMTANALDVFAHATASYAKPAFGITEIEKDGELHPVEEAT
VVNRPFGDLKRFRHTGLPESSPRLLIVAPMSGHYATLLRGTVERMLQSCIVYITDWADAKLVPMHEGHFDLDDYIDYLME
FLEQIRVESDGQRPHMMAVCQPSVPAFAATALLNQNNSPATPLTLTMMGGPIDTRESPTSVNDHAMNRPIEWFRQSVIAT
VPMQHRGAGRRVYPGFMQLSAFMSMNLGNHMMSHYEMFKHLTAGDEESAQATKDFYDEYRAVCDMTAEFYLQTVEEVFQK
HSIPNGTFRHRGELVDLDAITDTALLAIEGERDDISGLGQTKAALDLADCLPDAKKRYFMAEGAGHYGIFNGSKWRDMIA
PVVEEFIDEHGAVRA
>Mature_415_residues
MLYQAYELQRNWLNSVSSMASMSAEMLTSPANPLSHFGIGSMTANALDVFAHATASYAKPAFGITEIEKDGELHPVEEAT
VVNRPFGDLKRFRHTGLPESSPRLLIVAPMSGHYATLLRGTVERMLQSCIVYITDWADAKLVPMHEGHFDLDDYIDYLME
FLEQIRVESDGQRPHMMAVCQPSVPAFAATALLNQNNSPATPLTLTMMGGPIDTRESPTSVNDHAMNRPIEWFRQSVIAT
VPMQHRGAGRRVYPGFMQLSAFMSMNLGNHMMSHYEMFKHLTAGDEESAQATKDFYDEYRAVCDMTAEFYLQTVEEVFQK
HSIPNGTFRHRGELVDLDAITDTALLAIEGERDDISGLGQTKAALDLADCLPDAKKRYFMAEGAGHYGIFNGSKWRDMIA
PVVEEFIDEHGAVRA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46299; Mature: 46299

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQAYELQRNWLNSVSSMASMSAEMLTSPANPLSHFGIGSMTANALDVFAHATASYAKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
AFGITEIEKDGELHPVEEATVVNRPFGDLKRFRHTGLPESSPRLLIVAPMSGHYATLLRG
CCCCCEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
TVERMLQSCIVYITDWADAKLVPMHEGHFDLDDYIDYLMEFLEQIRVESDGQRPHMMAVC
HHHHHHHHHHEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
QPSVPAFAATALLNQNNSPATPLTLTMMGGPIDTRESPTSVNDHAMNRPIEWFRQSVIAT
CCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
VPMQHRGAGRRVYPGFMQLSAFMSMNLGNHMMSHYEMFKHLTAGDEESAQATKDFYDEYR
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AVCDMTAEFYLQTVEEVFQKHSIPNGTFRHRGELVDLDAITDTALLAIEGERDDISGLGQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECHHCCEEEEEEECCCCCCCCCCC
TKAALDLADCLPDAKKRYFMAEGAGHYGIFNGSKWRDMIAPVVEEFIDEHGAVRA
HHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLYQAYELQRNWLNSVSSMASMSAEMLTSPANPLSHFGIGSMTANALDVFAHATASYAKP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCC
AFGITEIEKDGELHPVEEATVVNRPFGDLKRFRHTGLPESSPRLLIVAPMSGHYATLLRG
CCCCCEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHH
TVERMLQSCIVYITDWADAKLVPMHEGHFDLDDYIDYLMEFLEQIRVESDGQRPHMMAVC
HHHHHHHHHHEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
QPSVPAFAATALLNQNNSPATPLTLTMMGGPIDTRESPTSVNDHAMNRPIEWFRQSVIAT
CCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
VPMQHRGAGRRVYPGFMQLSAFMSMNLGNHMMSHYEMFKHLTAGDEESAQATKDFYDEYR
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AVCDMTAEFYLQTVEEVFQKHSIPNGTFRHRGELVDLDAITDTALLAIEGERDDISGLGQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEECHHCCEEEEEEECCCCCCCCCCC
TKAALDLADCLPDAKKRYFMAEGAGHYGIFNGSKWRDMIAPVVEEFIDEHGAVRA
HHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA