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The map label for this gene is ompA [H]

Identifier: 85375193

GI number: 85375193

Start: 2384570

End: 2385451

Strand: Direct

Name: ompA [H]

Synonym: ELI_11830

Alternate gene names: 85375193

Gene position: 2384570-2385451 (Clockwise)

Preceding gene: 85375192

Following gene: 85375195

Centisome position: 78.12

GC content: 65.53

Gene sequence:

>882_bases
ATGTCCCTCTCGATTACCACTTCCGGCAAATTCGCTGTCGCTGCGGCCATGGCTGCAGCCTTGCCGCTCGGCGCTTCGGC
GCAGGACTACGAAAACACCGATCCCGACCGCACGCTGACCGTCTATGCCACCGTGCCCGCCGACATTGCGGAACTGCCCG
ATGGCCCCGAGCTCGAGGGTTATATTTCGGCGCGCAAGGACGAGCGCATGCAGGTCACCACCATCGGCGGCCAGCAATCG
GTGGTCTTCATCAGCGAAGCGACCGAGATCCGCTCGCGCGGCGGTTTCCTCGGCCTCAGCCGGACGAGCCTCGGCGCGGA
TGCGCTGATGAACGGTCTGCCGGTGAAGGTCGAAACCAAACAATGGAGCGACGGGCTGATCGCCAGCCGCGTCCGCCTGT
CGAACGACGATCTCGAAACCGCGACGATGATCCGCACCGGCACGGCGCAGGGCTTTGCCGAGCAGACCGCCGCCACCGAA
GCGCTGCGCGGACGCGTCGGCGATATCGACAATTACCTGATCAAGGACACCACCAACGTCTATTTCGACAGCGGCAAGTG
GCGGCTCGACGGCGAAGCCCAGCGCGACCTGTGCCAGGCCGCTGCGCAGGCCGAGGCGACCGATAACGCCCTGCTGCTGG
TCGTCGGCTACACCGATGCCGACGGCAGCGAGGAACTCAATCAGGAGCTGAGCGAACGCCGCGCGGCGCGAGTGACCAAC
TATCTGCAGCAGGAGTGCGGCTGGAAACCCTGGCGCATGCTGACCCCTACCGGCATGGCCGAAGCCGATCCGGCGGCGGA
TAACTACACCCCGCAAGGCAAGGCCCAGAACCGCCGCGTGGCGGTCAACATCCTCGTCAGCAAGGCTGTCGAGGGGCTGT
AA

Upstream 100 bases:

>100_bases
CTGCGCGATCGCGACCATCGATTTATCGGCGGGCTGCGTGTCCCCCACGGTGCCTCAACAGCGCACCTTGCGCGTGGCTC
GCTTTGCAAGGAGCAAACCA

Downstream 100 bases:

>100_bases
GGTCCGGTATTGACCATTTGAGAGGGGCGGGCTTCGGCTCGCCCCTTTTCGTGTGCGCTACCCCCGATCGCCGAACAGCG
CGGTACCGACCCGCACGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAELPDGPELEGYISARKDERMQVTTIGGQQS
VVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKVETKQWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATE
ALRGRVGDIDNYLIKDTTNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTN
YLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSKAVEGL

Sequences:

>Translated_293_residues
MSLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAELPDGPELEGYISARKDERMQVTTIGGQQS
VVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKVETKQWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATE
ALRGRVGDIDNYLIKDTTNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTN
YLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSKAVEGL
>Mature_292_residues
SLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAELPDGPELEGYISARKDERMQVTTIGGQQSV
VFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKVETKQWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATEA
LRGRVGDIDNYLIKDTTNVYFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTNY
LQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSKAVEGL

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=115, Percent_Identity=35.6521739130435, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31502; Mature: 31371

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAELPDGPELEG
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCC
YISARKDERMQVTTIGGQQSVVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKVETK
EEECCCCCCEEEEEECCCCEEEEEECHHHHHHCCCEEEECCCCCCHHHHHCCCCEEEECC
QWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATEALRGRVGDIDNYLIKDTTNV
CCCCCCEEHEEEECCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEE
YFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTN
EEECCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
YLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSKAVEGL
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC
>Mature Secondary Structure 
SLSITTSGKFAVAAAMAAALPLGASAQDYENTDPDRTLTVYATVPADIAELPDGPELEG
EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCC
YISARKDERMQVTTIGGQQSVVFISEATEIRSRGGFLGLSRTSLGADALMNGLPVKVETK
EEECCCCCCEEEEEECCCCEEEEEECHHHHHHCCCEEEECCCCCCHHHHHCCCCEEEECC
QWSDGLIASRVRLSNDDLETATMIRTGTAQGFAEQTAATEALRGRVGDIDNYLIKDTTNV
CCCCCCEEHEEEECCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCEE
YFDSGKWRLDGEAQRDLCQAAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTN
EEECCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
YLQQECGWKPWRMLTPTGMAEADPAADNYTPQGKAQNRRVAVNILVSKAVEGL
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]