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The map label for this gene is 85375071

Identifier: 85375071

GI number: 85375071

Start: 2268314

End: 2268766

Strand: Reverse

Name: 85375071

Synonym: ELI_11220

Alternate gene names: NA

Gene position: 2268766-2268314 (Counterclockwise)

Preceding gene: 85375072

Following gene: 85375070

Centisome position: 74.33

GC content: 62.69

Gene sequence:

>453_bases
ATGAAGCATTTTGCTGTGCCGGTTTTGTTGGCTTTCGTATTGATTGGCTGCGGCTCTGCGGAAGAGCCGCCTGTGGAACA
GATCGTGGTGCGTGAGCCGGGCGAGGTTGCCACCGCGGCCGCCCAACTTGCTGATAAGGCAAGCGACCCTGTGGCCGCAG
GTGAAGCTGGATTCGCCGCTTGCGCTGCCTGCCATGTCGCCAAGGCCGGAGCGGCCTCAGGCATCGGGCCCAACCTCTAC
GGCGTTGTCGGACGGGAAGCGGGAGCGCTGCCCAATTTCGGCTATTCTGATGCGATGGCGTCTGCGGATTTCGTGTGGGA
CGAAGCGAGGCTTAATGCCTATCTCGGCGATCCCAACGGCGTGGTGCCGGGCACTTCGATGGTTGCCGGCGCTGTGAGCG
ATGCGGCAAAGCGCGAAGCGATCATCGCCTACCTCGCCACACTGTCCGAGTGA

Upstream 100 bases:

>100_bases
CCATCGCTCCGGCGTTCACCAACGCAATCTTTGCCGCCACAGGTCGCCGCATTCGCGACCTGCCCGTCGCCAGGCAATTC
GCGTGACGGAGGCGGGGACA

Downstream 100 bases:

>100_bases
GCCTCTTGAGGCACGGCTGAGCCTTGGATTTTGCGCGAGAACTCCGATTTCTCAAGGACCGTCACTTGCAGGGTCAGGCG
ACGGTGCTGGTCACAGTCTG

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKHFAVPVLLAFVLIGCGSAEEPPVEQIVVREPGEVATAAAQLADKASDPVAAGEAGFAACAACHVAKAGAASGIGPNLY
GVVGREAGALPNFGYSDAMASADFVWDEARLNAYLGDPNGVVPGTSMVAGAVSDAAKREAIIAYLATLSE

Sequences:

>Translated_150_residues
MKHFAVPVLLAFVLIGCGSAEEPPVEQIVVREPGEVATAAAQLADKASDPVAAGEAGFAACAACHVAKAGAASGIGPNLY
GVVGREAGALPNFGYSDAMASADFVWDEARLNAYLGDPNGVVPGTSMVAGAVSDAAKREAIIAYLATLSE
>Mature_150_residues
MKHFAVPVLLAFVLIGCGSAEEPPVEQIVVREPGEVATAAAQLADKASDPVAAGEAGFAACAACHVAKAGAASGIGPNLY
GVVGREAGALPNFGYSDAMASADFVWDEARLNAYLGDPNGVVPGTSMVAGAVSDAAKREAIIAYLATLSE

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=97, Percent_Identity=34.020618556701, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17566554, Length=85, Percent_Identity=37.6470588235294, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17539604, Length=85, Percent_Identity=37.6470588235294, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322508, Length=90, Percent_Identity=34.4444444444444, Blast_Score=81, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=86, Percent_Identity=32.5581395348837, Blast_Score=78, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17137228, Length=90, Percent_Identity=36.6666666666667, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17137204, Length=87, Percent_Identity=40.2298850574713, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15004; Mature: 15004

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFAVPVLLAFVLIGCGSAEEPPVEQIVVREPGEVATAAAQLADKASDPVAAGEAGFAA
CCCHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHH
CAACHVAKAGAASGIGPNLYGVVGREAGALPNFGYSDAMASADFVWDEARLNAYLGDPNG
HHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEECCCCC
VVPGTSMVAGAVSDAAKREAIIAYLATLSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHFAVPVLLAFVLIGCGSAEEPPVEQIVVREPGEVATAAAQLADKASDPVAAGEAGFAA
CCCHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHH
CAACHVAKAGAASGIGPNLYGVVGREAGALPNFGYSDAMASADFVWDEARLNAYLGDPNG
HHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEECCCCC
VVPGTSMVAGAVSDAAKREAIIAYLATLSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]