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The map label for this gene is rpmF

Identifier: 85374553

GI number: 85374553

Start: 1763406

End: 1763585

Strand: Reverse

Name: rpmF

Synonym: ELI_08630

Alternate gene names: 85374553

Gene position: 1763585-1763406 (Counterclockwise)

Preceding gene: 85374555

Following gene: 85374552

Centisome position: 57.78

GC content: 56.67

Gene sequence:

>180_bases
ATGGCTGTCCCTAAGAGAAAAGTATCGCCGCATCGCCGTGGCAACCGTCGTGCCCATGATTCGCTGAAGGTCGAGGCCTT
CCACGAATGCAACAATTGCGGCGAATTGAAGCGTCCGCACAACATGTGCTCGCACTGCGGCTTCTACAACGGTCGCGAAG
TCCTCGCTCCGAGCCTTTAA

Upstream 100 bases:

>100_bases
ATGCGACTGGTAAGCACCGCACCCGCTGATGGGTTGTGTGTGCATCGCCTATCGCCTAGGGCGGCTCGCAACAGTTTGAA
TTCAAGGAACAGGTGCCGCC

Downstream 100 bases:

>100_bases
TTCCCACTAGGGAGAGCGCGTAATGAGCCTGCCCCGTATCGCCCTTGATGCGATGGGCGGGGATGTAGGCGTGCGCGTGA
TGATCGATGGCGCTGCCGAG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MAVPKRKVSPHRRGNRRAHDSLKVEAFHECNNCGELKRPHNMCSHCGFYNGREVLAPSL

Sequences:

>Translated_59_residues
MAVPKRKVSPHRRGNRRAHDSLKVEAFHECNNCGELKRPHNMCSHCGFYNGREVLAPSL
>Mature_58_residues
AVPKRKVSPHRRGNRRAHDSLKVEAFHECNNCGELKRPHNMCSHCGFYNGREVLAPSL

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_ERYLH (Q2N923)

Other databases:

- EMBL:   CP000157
- RefSeq:   YP_458615.1
- ProteinModelPortal:   Q2N923
- SMR:   Q2N923
- STRING:   Q2N923
- GeneID:   3871101
- GenomeReviews:   CP000157_GR
- KEGG:   eli:ELI_08630
- NMPDR:   fig|314225.3.peg.1316
- eggNOG:   COG0333
- HOGENOM:   HBG728381
- OMA:   AVCNNCK
- ProtClustDB:   PRK12286
- BioCyc:   ELIT314225:ELI_08630-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6743; Mature: 6612

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRKVSPHRRGNRRAHDSLKVEAFHECNNCGELKRPHNMCSHCGFYNGREVLAPSL
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPKRKVSPHRRGNRRAHDSLKVEAFHECNNCGELKRPHNMCSHCGFYNGREVLAPSL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA